Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_13755 and PS417_13760 are separated by 103 nucleotides PS417_13760 and PS417_13765 are separated by 58 nucleotides
PS417_13755: PS417_13755 - oxidoreductase, at 3,021,309 to 3,022,058
_13755
PS417_13760: PS417_13760 - transcriptional regulator, at 3,022,162 to 3,022,521
_13760
PS417_13765: PS417_13765 - histidine kinase, at 3,022,580 to 3,024,193
_13765
Position (kb)
3022
3023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3021.195 kb on + strand at 3021.196 kb on - strand at 3021.610 kb on + strand, within PS417_13755 at 3021.690 kb on + strand, within PS417_13755 at 3021.952 kb on - strand, within PS417_13755 at 3021.952 kb on - strand, within PS417_13755 at 3022.029 kb on + strand at 3022.029 kb on + strand at 3022.030 kb on - strand at 3022.095 kb on - strand at 3022.134 kb on + strand at 3022.267 kb on + strand, within PS417_13760 at 3022.277 kb on + strand, within PS417_13760 at 3022.394 kb on - strand, within PS417_13760 at 3022.464 kb on + strand, within PS417_13760 at 3022.465 kb on - strand, within PS417_13760 at 3022.675 kb on + strand at 3022.676 kb on - strand at 3022.760 kb on - strand, within PS417_13765 at 3022.780 kb on + strand, within PS417_13765 at 3022.968 kb on - strand, within PS417_13765 at 3022.968 kb on - strand, within PS417_13765
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,021,195 + +0.3 3,021,196 - -0.6 3,021,610 + PS417_13755 0.40 -1.3 3,021,690 + PS417_13755 0.51 -1.1 3,021,952 - PS417_13755 0.86 +0.7 3,021,952 - PS417_13755 0.86 +0.1 3,022,029 + +1.0 3,022,029 + -2.3 3,022,030 - -1.0 3,022,095 - +0.6 3,022,134 + +0.3 3,022,267 + PS417_13760 0.29 -0.8 3,022,277 + PS417_13760 0.32 +0.3 3,022,394 - PS417_13760 0.64 -0.5 3,022,464 + PS417_13760 0.84 -0.8 3,022,465 - PS417_13760 0.84 -0.6 3,022,675 + +2.0 3,022,676 - +0.1 3,022,760 - PS417_13765 0.11 -0.3 3,022,780 + PS417_13765 0.12 +0.4 3,022,968 - PS417_13765 0.24 -1.5 3,022,968 - PS417_13765 0.24 -0.8
Or see this region's nucleotide sequence