Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11485 and PS417_11495 are separated by 293 nucleotides PS417_11495 and PS417_11500 are separated by 9 nucleotides
PS417_11485: PS417_11485 - AraC family transcriptional regulator, at 2,471,092 to 2,471,856
_11485
PS417_11495: PS417_11495 - oxidoreductase, at 2,472,150 to 2,473,109
_11495
PS417_11500: PS417_11500 - hypothetical protein, at 2,473,119 to 2,474,147
_11500
Position (kb)
2472
2473
2474 Strain fitness (log2 ratio)
-1
0
1
2 at 2471.159 kb on - strand at 2471.173 kb on + strand, within PS417_11485 at 2471.347 kb on + strand, within PS417_11485 at 2471.347 kb on + strand, within PS417_11485 at 2471.845 kb on + strand at 2471.910 kb on + strand at 2471.911 kb on - strand at 2472.441 kb on + strand, within PS417_11495 at 2472.686 kb on - strand, within PS417_11495 at 2472.873 kb on + strand, within PS417_11495 at 2472.874 kb on - strand, within PS417_11495 at 2472.874 kb on - strand, within PS417_11495 at 2472.877 kb on + strand at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.877 kb on + strand, within PS417_11495 at 2472.878 kb on - strand, within PS417_11495 at 2472.942 kb on + strand, within PS417_11495 at 2472.943 kb on - strand, within PS417_11495 at 2473.060 kb on - strand at 2473.060 kb on - strand at 2473.060 kb on - strand at 2473.363 kb on + strand, within PS417_11500 at 2473.363 kb on + strand, within PS417_11500 at 2473.363 kb on + strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.364 kb on - strand, within PS417_11500 at 2473.834 kb on + strand, within PS417_11500
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 2,471,159 - -0.6 2,471,173 + PS417_11485 0.11 +1.1 2,471,347 + PS417_11485 0.33 +1.5 2,471,347 + PS417_11485 0.33 -1.5 2,471,845 + +0.8 2,471,910 + -0.2 2,471,911 - +1.8 2,472,441 + PS417_11495 0.30 +1.9 2,472,686 - PS417_11495 0.56 -0.0 2,472,873 + PS417_11495 0.75 +1.0 2,472,874 - PS417_11495 0.75 +0.4 2,472,874 - PS417_11495 0.75 -1.6 2,472,877 + -0.4 2,472,877 + PS417_11495 0.76 +1.3 2,472,877 + PS417_11495 0.76 -1.6 2,472,877 + PS417_11495 0.76 -0.0 2,472,877 + PS417_11495 0.76 +1.1 2,472,877 + PS417_11495 0.76 -1.0 2,472,877 + PS417_11495 0.76 +0.6 2,472,877 + PS417_11495 0.76 -1.0 2,472,878 - PS417_11495 0.76 +0.4 2,472,942 + PS417_11495 0.82 +1.4 2,472,943 - PS417_11495 0.83 +1.0 2,473,060 - +0.6 2,473,060 - +0.3 2,473,060 - +0.5 2,473,363 + PS417_11500 0.24 -0.0 2,473,363 + PS417_11500 0.24 +0.9 2,473,363 + PS417_11500 0.24 +0.3 2,473,364 - PS417_11500 0.24 +1.9 2,473,364 - PS417_11500 0.24 +1.0 2,473,364 - PS417_11500 0.24 -1.4 2,473,834 + PS417_11500 0.69 +0.3
Or see this region's nucleotide sequence