Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11055 and PS417_11060 are separated by 101 nucleotides PS417_11060 and PS417_11065 are separated by 91 nucleotides
PS417_11055: PS417_11055 - AraC family transcriptional regulator, at 2,369,538 to 2,370,500
_11055
PS417_11060: PS417_11060 - transporter, at 2,370,602 to 2,371,825
_11060
PS417_11065: PS417_11065 - S-transferase, at 2,371,917 to 2,372,750
_11065
Position (kb)
2370
2371
2372 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2369.627 kb on + strand at 2369.627 kb on + strand at 2369.627 kb on + strand at 2369.628 kb on - strand at 2369.629 kb on + strand at 2369.777 kb on + strand, within PS417_11055 at 2370.166 kb on - strand, within PS417_11055 at 2370.282 kb on - strand, within PS417_11055 at 2370.356 kb on - strand, within PS417_11055 at 2370.356 kb on - strand, within PS417_11055 at 2370.559 kb on - strand at 2370.717 kb on - strand at 2371.071 kb on + strand, within PS417_11060 at 2371.115 kb on - strand, within PS417_11060 at 2371.290 kb on + strand, within PS417_11060 at 2371.320 kb on - strand, within PS417_11060 at 2371.320 kb on - strand, within PS417_11060 at 2371.437 kb on + strand, within PS417_11060 at 2371.912 kb on + strand at 2372.052 kb on + strand, within PS417_11065 at 2372.052 kb on + strand, within PS417_11065 at 2372.053 kb on - strand, within PS417_11065 at 2372.134 kb on - strand, within PS417_11065 at 2372.376 kb on + strand, within PS417_11065 at 2372.403 kb on + strand, within PS417_11065 at 2372.409 kb on + strand, within PS417_11065 at 2372.409 kb on + strand, within PS417_11065 at 2372.430 kb on + strand, within PS417_11065 at 2372.523 kb on + strand, within PS417_11065 at 2372.524 kb on - strand, within PS417_11065 at 2372.583 kb on + strand, within PS417_11065 at 2372.748 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 2,369,627 + +0.9 2,369,627 + +1.6 2,369,627 + -0.0 2,369,628 - -0.1 2,369,629 + -0.4 2,369,777 + PS417_11055 0.25 -0.9 2,370,166 - PS417_11055 0.65 -2.1 2,370,282 - PS417_11055 0.77 -1.7 2,370,356 - PS417_11055 0.85 -0.6 2,370,356 - PS417_11055 0.85 +1.0 2,370,559 - -1.1 2,370,717 - -0.5 2,371,071 + PS417_11060 0.38 -1.3 2,371,115 - PS417_11060 0.42 +0.5 2,371,290 + PS417_11060 0.56 -2.2 2,371,320 - PS417_11060 0.59 -1.3 2,371,320 - PS417_11060 0.59 +0.7 2,371,437 + PS417_11060 0.68 -1.5 2,371,912 + -0.4 2,372,052 + PS417_11065 0.16 -1.8 2,372,052 + PS417_11065 0.16 -0.0 2,372,053 - PS417_11065 0.16 -3.3 2,372,134 - PS417_11065 0.26 +0.7 2,372,376 + PS417_11065 0.55 +0.4 2,372,403 + PS417_11065 0.58 -2.5 2,372,409 + PS417_11065 0.59 +0.7 2,372,409 + PS417_11065 0.59 +0.1 2,372,430 + PS417_11065 0.62 -1.4 2,372,523 + PS417_11065 0.73 -1.7 2,372,524 - PS417_11065 0.73 -2.2 2,372,583 + PS417_11065 0.80 +1.6 2,372,748 + +0.1
Or see this region's nucleotide sequence