Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08665 and PS417_08670 are separated by 76 nucleotides PS417_08670 and PS417_08675 overlap by 17 nucleotides PS417_08675 and PS417_08680 are separated by 128 nucleotides PS417_08680 and PS417_08685 overlap by 4 nucleotides
PS417_08665: PS417_08665 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 1,890,659 to 1,891,261
_08665
PS417_08670: PS417_08670 - molybdopterin biosynthesis protein B, at 1,891,338 to 1,891,877
_08670
PS417_08675: PS417_08675 - molybdenum cofactor biosynthesis protein MoaA, at 1,891,861 to 1,893,087
_08675
PS417_08680: PS417_08680 - flagellar biosynthesis protein FlhB, at 1,893,216 to 1,893,545
_08680
PS417_08685: PS417_08685 - flagellar hook-length control protein FliK, at 1,893,542 to 1,895,119
_08685
Position (kb)
1891
1892
1893
1894 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1891.071 kb on + strand, within PS417_08665 at 1891.071 kb on + strand, within PS417_08665 at 1891.072 kb on - strand, within PS417_08665 at 1891.072 kb on - strand, within PS417_08665 at 1891.195 kb on + strand, within PS417_08665 at 1891.299 kb on + strand at 1891.300 kb on - strand at 1891.301 kb on + strand at 1891.301 kb on + strand at 1891.302 kb on - strand at 1891.302 kb on - strand at 1891.384 kb on + strand at 1891.406 kb on + strand, within PS417_08670 at 1892.324 kb on + strand, within PS417_08675 at 1892.324 kb on + strand, within PS417_08675 at 1892.325 kb on - strand, within PS417_08675 at 1892.486 kb on - strand, within PS417_08675 at 1892.821 kb on + strand, within PS417_08675 at 1892.821 kb on + strand, within PS417_08675 at 1892.822 kb on - strand, within PS417_08675 at 1892.822 kb on - strand, within PS417_08675 at 1893.069 kb on - strand at 1893.069 kb on - strand at 1893.337 kb on + strand, within PS417_08680 at 1893.407 kb on - strand at 1893.503 kb on - strand, within PS417_08680
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 1,891,071 + PS417_08665 0.68 -0.4 1,891,071 + PS417_08665 0.68 -0.7 1,891,072 - PS417_08665 0.68 -0.3 1,891,072 - PS417_08665 0.68 +0.7 1,891,195 + PS417_08665 0.89 +1.0 1,891,299 + +0.0 1,891,300 - -0.1 1,891,301 + +2.3 1,891,301 + -3.4 1,891,302 - -0.3 1,891,302 - +1.0 1,891,384 + +0.6 1,891,406 + PS417_08670 0.13 +0.1 1,892,324 + PS417_08675 0.38 -0.1 1,892,324 + PS417_08675 0.38 +0.2 1,892,325 - PS417_08675 0.38 -1.0 1,892,486 - PS417_08675 0.51 +0.2 1,892,821 + PS417_08675 0.78 +1.5 1,892,821 + PS417_08675 0.78 +0.1 1,892,822 - PS417_08675 0.78 -0.6 1,892,822 - PS417_08675 0.78 -0.3 1,893,069 - -0.3 1,893,069 - +0.4 1,893,337 + PS417_08680 0.37 +1.0 1,893,407 - +0.5 1,893,503 - PS417_08680 0.87 +0.3
Or see this region's nucleotide sequence