Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22710 and PS417_22715 are separated by 148 nucleotides PS417_22715 and PS417_22720 are separated by 162 nucleotides PS417_22720 and PS417_22725 are separated by 139 nucleotides
PS417_22710: PS417_22710 - TonB-dependent receptor, at 4,918,205 to 4,920,769
_22710
PS417_22715: PS417_22715 - heme oxygenase, at 4,920,918 to 4,921,526
_22715
PS417_22720: PS417_22720 - membrane protein, at 4,921,689 to 4,922,090
_22720
PS417_22725: PS417_22725 - chemotaxis protein, at 4,922,230 to 4,924,368
_22725
Position (kb)
4921
4922
4923 Strain fitness (log2 ratio)
-2
-1
0
1 at 4920.952 kb on + strand at 4920.978 kb on - strand at 4921.072 kb on - strand at 4921.072 kb on - strand, within PS417_22715 at 4921.313 kb on - strand, within PS417_22715 at 4921.484 kb on - strand at 4921.584 kb on + strand at 4921.599 kb on - strand at 4921.644 kb on + strand at 4921.749 kb on + strand, within PS417_22720 at 4921.749 kb on + strand, within PS417_22720 at 4921.749 kb on + strand, within PS417_22720 at 4921.750 kb on - strand, within PS417_22720 at 4921.750 kb on - strand, within PS417_22720 at 4922.086 kb on + strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.087 kb on - strand at 4922.101 kb on - strand at 4922.101 kb on - strand at 4922.101 kb on - strand at 4922.108 kb on - strand at 4922.168 kb on - strand at 4922.168 kb on - strand at 4922.193 kb on + strand at 4922.193 kb on + strand at 4922.194 kb on - strand at 4922.194 kb on - strand at 4922.194 kb on - strand at 4922.229 kb on + strand at 4922.229 kb on + strand at 4922.229 kb on + strand at 4922.229 kb on + strand at 4922.230 kb on - strand at 4922.698 kb on + strand, within PS417_22725 at 4922.699 kb on - strand, within PS417_22725 at 4922.837 kb on + strand, within PS417_22725 at 4922.838 kb on - strand, within PS417_22725
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 4,920,952 + -0.1 4,920,978 - +0.2 4,921,072 - -0.8 4,921,072 - PS417_22715 0.25 -0.3 4,921,313 - PS417_22715 0.65 +0.3 4,921,484 - -2.3 4,921,584 + -1.0 4,921,599 - -0.2 4,921,644 + -0.3 4,921,749 + PS417_22720 0.15 +0.8 4,921,749 + PS417_22720 0.15 +0.2 4,921,749 + PS417_22720 0.15 +0.6 4,921,750 - PS417_22720 0.15 -0.1 4,921,750 - PS417_22720 0.15 +1.1 4,922,086 + -0.4 4,922,087 - +0.2 4,922,087 - -1.1 4,922,087 - -0.8 4,922,087 - -0.8 4,922,101 - +0.9 4,922,101 - +1.1 4,922,101 - +0.2 4,922,108 - +1.5 4,922,168 - -0.1 4,922,168 - -0.1 4,922,193 + -0.2 4,922,193 + +0.7 4,922,194 - -0.3 4,922,194 - +0.1 4,922,194 - -0.6 4,922,229 + +1.4 4,922,229 + -0.2 4,922,229 + +0.0 4,922,229 + +0.3 4,922,230 - +0.2 4,922,698 + PS417_22725 0.22 -1.7 4,922,699 - PS417_22725 0.22 +1.0 4,922,837 + PS417_22725 0.28 +1.2 4,922,838 - PS417_22725 0.28 -0.6
Or see this region's nucleotide sequence