Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17995 and PS417_18000 overlap by 22 nucleotides PS417_18000 and PS417_18005 are separated by 97 nucleotides
PS417_17995: PS417_17995 - hypothetical protein, at 3,923,606 to 3,924,814
_17995
PS417_18000: PS417_18000 - hypothetical protein, at 3,924,793 to 3,925,365
_18000
PS417_18005: PS417_18005 - hypothetical protein, at 3,925,463 to 3,927,391
_18005
Position (kb)
3924
3925
3926 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3924.110 kb on + strand, within PS417_17995 at 3924.110 kb on + strand, within PS417_17995 at 3924.111 kb on - strand, within PS417_17995 at 3924.111 kb on - strand, within PS417_17995 at 3924.163 kb on + strand, within PS417_17995 at 3924.183 kb on + strand, within PS417_17995 at 3924.468 kb on - strand, within PS417_17995 at 3924.692 kb on + strand, within PS417_17995 at 3924.692 kb on + strand, within PS417_17995 at 3924.805 kb on + strand at 3924.812 kb on + strand at 3924.867 kb on - strand, within PS417_18000 at 3924.909 kb on - strand, within PS417_18000 at 3924.921 kb on + strand, within PS417_18000 at 3925.042 kb on - strand, within PS417_18000 at 3925.101 kb on + strand, within PS417_18000 at 3925.101 kb on + strand, within PS417_18000 at 3925.191 kb on + strand, within PS417_18000 at 3925.301 kb on + strand, within PS417_18000 at 3925.443 kb on - strand at 3925.449 kb on - strand at 3925.449 kb on - strand at 3925.691 kb on + strand, within PS417_18005 at 3925.691 kb on + strand, within PS417_18005 at 3925.692 kb on - strand, within PS417_18005 at 3925.850 kb on + strand at 3925.925 kb on - strand, within PS417_18005 at 3925.925 kb on - strand, within PS417_18005 at 3926.086 kb on + strand, within PS417_18005 at 3926.087 kb on - strand, within PS417_18005 at 3926.097 kb on - strand, within PS417_18005 at 3926.233 kb on - strand, within PS417_18005
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 3,924,110 + PS417_17995 0.42 -0.3 3,924,110 + PS417_17995 0.42 +0.4 3,924,111 - PS417_17995 0.42 -1.4 3,924,111 - PS417_17995 0.42 -0.2 3,924,163 + PS417_17995 0.46 -0.5 3,924,183 + PS417_17995 0.48 -0.2 3,924,468 - PS417_17995 0.71 -1.2 3,924,692 + PS417_17995 0.90 +0.1 3,924,692 + PS417_17995 0.90 +0.7 3,924,805 + +0.4 3,924,812 + +0.3 3,924,867 - PS417_18000 0.13 -0.2 3,924,909 - PS417_18000 0.20 +0.2 3,924,921 + PS417_18000 0.22 -0.2 3,925,042 - PS417_18000 0.43 -2.7 3,925,101 + PS417_18000 0.54 -2.5 3,925,101 + PS417_18000 0.54 -2.8 3,925,191 + PS417_18000 0.69 -0.9 3,925,301 + PS417_18000 0.89 -1.0 3,925,443 - -0.9 3,925,449 - +0.0 3,925,449 - +0.7 3,925,691 + PS417_18005 0.12 -0.8 3,925,691 + PS417_18005 0.12 -0.6 3,925,692 - PS417_18005 0.12 -0.1 3,925,850 + -1.7 3,925,925 - PS417_18005 0.24 -0.2 3,925,925 - PS417_18005 0.24 -1.1 3,926,086 + PS417_18005 0.32 +1.0 3,926,087 - PS417_18005 0.32 -0.3 3,926,097 - PS417_18005 0.33 +0.1 3,926,233 - PS417_18005 0.40 -0.4
Or see this region's nucleotide sequence