Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00695 and PS417_00700 are separated by 33 nucleotides PS417_00700 and PS417_00705 are separated by 237 nucleotides PS417_00705 and PS417_00710 overlap by 4 nucleotides
PS417_00695: PS417_00695 - membrane protein, at 144,992 to 146,596
_00695
PS417_00700: PS417_00700 - hypothetical protein, at 146,630 to 146,875
_00700
PS417_00705: PS417_00705 - MarR family transcriptional regulator, at 147,113 to 147,523
_00705
PS417_00710: PS417_00710 - fusaric acid resistance protein, at 147,520 to 149,598
_00710
Position (kb) 147
148 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 146.267 kb on + strand, within PS417_00695 at 146.268 kb on - strand, within PS417_00695 at 146.276 kb on + strand, within PS417_00695 at 146.277 kb on - strand, within PS417_00695 at 146.277 kb on - strand, within PS417_00695 at 146.282 kb on + strand, within PS417_00695 at 146.285 kb on + strand, within PS417_00695 at 146.285 kb on + strand, within PS417_00695 at 146.315 kb on + strand, within PS417_00695 at 146.316 kb on - strand, within PS417_00695 at 146.316 kb on - strand, within PS417_00695 at 146.360 kb on + strand, within PS417_00695 at 146.360 kb on + strand, within PS417_00695 at 146.398 kb on + strand, within PS417_00695 at 146.398 kb on + strand, within PS417_00695 at 146.399 kb on - strand, within PS417_00695 at 146.399 kb on - strand, within PS417_00695 at 146.399 kb on - strand, within PS417_00695 at 146.402 kb on + strand, within PS417_00695 at 146.594 kb on + strand at 146.647 kb on + strand at 146.647 kb on + strand at 146.647 kb on + strand at 146.648 kb on - strand at 146.648 kb on - strand at 146.964 kb on - strand at 146.976 kb on - strand at 146.976 kb on - strand at 147.053 kb on + strand at 147.072 kb on - strand at 147.148 kb on + strand at 147.186 kb on - strand, within PS417_00705 at 147.329 kb on + strand, within PS417_00705 at 147.330 kb on - strand, within PS417_00705 at 147.565 kb on + strand at 147.566 kb on - strand at 147.566 kb on - strand at 147.604 kb on + strand at 147.604 kb on + strand at 147.605 kb on - strand at 147.605 kb on - strand at 147.658 kb on + strand at 147.658 kb on + strand at 147.658 kb on + strand at 147.658 kb on + strand at 147.659 kb on - strand at 147.659 kb on - strand at 147.659 kb on - strand at 147.659 kb on - strand at 147.659 kb on - strand at 147.706 kb on + strand at 147.707 kb on - strand at 147.778 kb on + strand, within PS417_00710 at 147.778 kb on + strand, within PS417_00710 at 147.779 kb on - strand, within PS417_00710 at 147.857 kb on - strand, within PS417_00710 at 147.857 kb on - strand, within PS417_00710 at 147.913 kb on - strand, within PS417_00710 at 148.206 kb on - strand, within PS417_00710 at 148.209 kb on + strand, within PS417_00710 at 148.210 kb on - strand, within PS417_00710 at 148.210 kb on - strand, within PS417_00710 at 148.212 kb on + strand, within PS417_00710 at 148.233 kb on + strand, within PS417_00710 at 148.234 kb on - strand, within PS417_00710 at 148.279 kb on + strand, within PS417_00710 at 148.279 kb on + strand, within PS417_00710 at 148.279 kb on + strand, within PS417_00710 at 148.279 kb on + strand, within PS417_00710 at 148.279 kb on + strand, within PS417_00710 at 148.280 kb on - strand, within PS417_00710 at 148.280 kb on - strand, within PS417_00710 at 148.280 kb on - strand, within PS417_00710
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 146,267 + PS417_00695 0.79 +0.0 146,268 - PS417_00695 0.80 +0.9 146,276 + PS417_00695 0.80 +0.4 146,277 - PS417_00695 0.80 +0.3 146,277 - PS417_00695 0.80 -0.1 146,282 + PS417_00695 0.80 +0.0 146,285 + PS417_00695 0.81 -0.1 146,285 + PS417_00695 0.81 +0.2 146,315 + PS417_00695 0.82 -2.0 146,316 - PS417_00695 0.82 -0.0 146,316 - PS417_00695 0.82 +0.2 146,360 + PS417_00695 0.85 -0.6 146,360 + PS417_00695 0.85 +0.2 146,398 + PS417_00695 0.88 -1.3 146,398 + PS417_00695 0.88 +1.2 146,399 - PS417_00695 0.88 +2.8 146,399 - PS417_00695 0.88 -0.0 146,399 - PS417_00695 0.88 -0.0 146,402 + PS417_00695 0.88 +0.2 146,594 + -0.4 146,647 + -0.9 146,647 + -0.5 146,647 + -0.3 146,648 - -2.0 146,648 - -1.2 146,964 - +0.4 146,976 - -1.4 146,976 - -0.4 147,053 + -0.2 147,072 - +0.2 147,148 + +0.6 147,186 - PS417_00705 0.18 -0.6 147,329 + PS417_00705 0.53 -1.8 147,330 - PS417_00705 0.53 -2.4 147,565 + +1.0 147,566 - +0.9 147,566 - -0.8 147,604 + -1.4 147,604 + +0.5 147,605 - +1.6 147,605 - -0.9 147,658 + -0.1 147,658 + -3.0 147,658 + -0.4 147,658 + -0.2 147,659 - -0.3 147,659 - +0.0 147,659 - -1.4 147,659 - -0.4 147,659 - -0.3 147,706 + +0.2 147,707 - +0.8 147,778 + PS417_00710 0.12 -0.3 147,778 + PS417_00710 0.12 -1.9 147,779 - PS417_00710 0.12 +1.0 147,857 - PS417_00710 0.16 +0.1 147,857 - PS417_00710 0.16 +0.1 147,913 - PS417_00710 0.19 -0.8 148,206 - PS417_00710 0.33 +0.0 148,209 + PS417_00710 0.33 -0.5 148,210 - PS417_00710 0.33 -0.4 148,210 - PS417_00710 0.33 +0.3 148,212 + PS417_00710 0.33 -0.1 148,233 + PS417_00710 0.34 -0.5 148,234 - PS417_00710 0.34 +0.0 148,279 + PS417_00710 0.37 -0.2 148,279 + PS417_00710 0.37 -0.4 148,279 + PS417_00710 0.37 -0.9 148,279 + PS417_00710 0.37 -0.6 148,279 + PS417_00710 0.37 +0.2 148,280 - PS417_00710 0.37 -0.7 148,280 - PS417_00710 0.37 -1.1 148,280 - PS417_00710 0.37 +0.5
Or see this region's nucleotide sequence