Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11450 and PS417_11455 are separated by 103 nucleotides PS417_11455 and PS417_11460 are separated by 41 nucleotides
PS417_11450: PS417_11450 - AraC family transcriptional regulator, at 2,464,556 to 2,465,353
_11450
PS417_11455: PS417_11455 - hypothetical protein, at 2,465,457 to 2,467,010
_11455
PS417_11460: PS417_11460 - divalent metal cation transporter MntH, at 2,467,052 to 2,468,374
_11460
Position (kb)
2465
2466
2467
2468 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2464.536 kb on + strand at 2464.654 kb on + strand, within PS417_11450 at 2464.655 kb on - strand, within PS417_11450 at 2464.679 kb on + strand, within PS417_11450 at 2464.814 kb on + strand, within PS417_11450 at 2464.815 kb on - strand, within PS417_11450 at 2464.896 kb on + strand, within PS417_11450 at 2464.897 kb on - strand, within PS417_11450 at 2465.318 kb on + strand at 2465.422 kb on + strand at 2465.423 kb on - strand at 2465.544 kb on + strand at 2465.544 kb on + strand at 2465.760 kb on + strand, within PS417_11455 at 2465.761 kb on - strand, within PS417_11455 at 2466.013 kb on + strand, within PS417_11455 at 2466.014 kb on - strand, within PS417_11455 at 2466.109 kb on - strand, within PS417_11455 at 2466.214 kb on - strand, within PS417_11455 at 2466.543 kb on - strand, within PS417_11455 at 2467.011 kb on + strand at 2467.350 kb on + strand, within PS417_11460 at 2467.351 kb on - strand, within PS417_11460 at 2467.351 kb on - strand, within PS417_11460 at 2467.351 kb on - strand, within PS417_11460 at 2467.745 kb on + strand, within PS417_11460 at 2467.746 kb on - strand, within PS417_11460
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 2,464,536 + -0.2 2,464,654 + PS417_11450 0.12 +0.1 2,464,655 - PS417_11450 0.12 -0.4 2,464,679 + PS417_11450 0.15 -0.8 2,464,814 + PS417_11450 0.32 +0.3 2,464,815 - PS417_11450 0.32 +1.8 2,464,896 + PS417_11450 0.43 +0.6 2,464,897 - PS417_11450 0.43 +0.1 2,465,318 + -1.0 2,465,422 + -1.6 2,465,423 - +0.1 2,465,544 + +0.4 2,465,544 + -0.5 2,465,760 + PS417_11455 0.19 +1.0 2,465,761 - PS417_11455 0.20 -1.1 2,466,013 + PS417_11455 0.36 -2.2 2,466,014 - PS417_11455 0.36 -0.1 2,466,109 - PS417_11455 0.42 +0.2 2,466,214 - PS417_11455 0.49 -1.7 2,466,543 - PS417_11455 0.70 -2.3 2,467,011 + -0.8 2,467,350 + PS417_11460 0.23 +0.6 2,467,351 - PS417_11460 0.23 -0.2 2,467,351 - PS417_11460 0.23 +0.2 2,467,351 - PS417_11460 0.23 -0.1 2,467,745 + PS417_11460 0.52 +0.6 2,467,746 - PS417_11460 0.52 -0.3
Or see this region's nucleotide sequence