Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03140 and PS417_03145 are separated by 114 nucleotides PS417_03145 and PS417_03150 are separated by 124 nucleotides
PS417_03140: PS417_03140 - 3-ketoacyl-ACP reductase, at 720,409 to 721,752
_03140
PS417_03145: PS417_03145 - acetyl-CoA acetyltransferase, at 721,867 to 723,144
_03145
PS417_03150: PS417_03150 - kinase, at 723,269 to 724,165
_03150
Position (kb) 721
722
723
724 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 721.194 kb on + strand, within PS417_03140 at 721.196 kb on + strand, within PS417_03140 at 721.196 kb on + strand, within PS417_03140 at 721.196 kb on + strand, within PS417_03140 at 721.197 kb on - strand, within PS417_03140 at 721.197 kb on - strand, within PS417_03140 at 721.197 kb on - strand, within PS417_03140 at 721.547 kb on + strand, within PS417_03140 at 721.553 kb on + strand, within PS417_03140 at 721.553 kb on + strand, within PS417_03140 at 721.554 kb on - strand, within PS417_03140 at 721.738 kb on - strand at 721.739 kb on + strand at 721.739 kb on + strand at 721.887 kb on - strand at 721.997 kb on - strand, within PS417_03145 at 722.673 kb on - strand, within PS417_03145 at 722.851 kb on + strand, within PS417_03145 at 722.985 kb on + strand, within PS417_03145 at 723.037 kb on - strand at 723.037 kb on - strand at 723.037 kb on - strand at 723.153 kb on + strand at 723.168 kb on + strand at 723.216 kb on + strand at 723.217 kb on - strand at 723.217 kb on - strand at 723.231 kb on - strand at 723.237 kb on - strand at 723.247 kb on - strand at 723.280 kb on + strand at 723.280 kb on + strand at 723.281 kb on - strand at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.362 kb on + strand, within PS417_03150 at 723.363 kb on - strand, within PS417_03150 at 723.621 kb on + strand, within PS417_03150 at 723.621 kb on + strand, within PS417_03150 at 723.685 kb on - strand, within PS417_03150 at 723.838 kb on - strand, within PS417_03150 at 723.903 kb on - strand, within PS417_03150 at 723.966 kb on - strand, within PS417_03150 at 723.997 kb on - strand, within PS417_03150 at 723.997 kb on - strand, within PS417_03150
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 721,194 + PS417_03140 0.58 -0.1 721,196 + PS417_03140 0.59 -1.0 721,196 + PS417_03140 0.59 +0.3 721,196 + PS417_03140 0.59 +0.3 721,197 - PS417_03140 0.59 +2.5 721,197 - PS417_03140 0.59 -1.2 721,197 - PS417_03140 0.59 +1.9 721,547 + PS417_03140 0.85 -0.1 721,553 + PS417_03140 0.85 -1.0 721,553 + PS417_03140 0.85 +0.3 721,554 - PS417_03140 0.85 +0.4 721,738 - -5.1 721,739 + -2.8 721,739 + -1.0 721,887 - -1.8 721,997 - PS417_03145 0.10 +0.3 722,673 - PS417_03145 0.63 -2.5 722,851 + PS417_03145 0.77 -0.5 722,985 + PS417_03145 0.87 -1.7 723,037 - +0.8 723,037 - -0.4 723,037 - +0.3 723,153 + -2.9 723,168 + -0.3 723,216 + -0.1 723,217 - +0.1 723,217 - +0.8 723,231 - -0.5 723,237 - +0.2 723,247 - -2.8 723,280 + +0.6 723,280 + +0.2 723,281 - +1.3 723,362 + PS417_03150 0.10 +0.5 723,362 + PS417_03150 0.10 -1.9 723,362 + PS417_03150 0.10 -0.1 723,362 + PS417_03150 0.10 -0.1 723,362 + PS417_03150 0.10 -0.0 723,363 - PS417_03150 0.10 +0.4 723,621 + PS417_03150 0.39 -0.5 723,621 + PS417_03150 0.39 +0.1 723,685 - PS417_03150 0.46 +0.6 723,838 - PS417_03150 0.63 -1.1 723,903 - PS417_03150 0.71 -0.5 723,966 - PS417_03150 0.78 -0.2 723,997 - PS417_03150 0.81 -1.7 723,997 - PS417_03150 0.81 +0.0
Or see this region's nucleotide sequence