Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26935 and PS417_26940 are separated by 22 nucleotides PS417_26940 and PS417_26945 are separated by 1 nucleotides
PS417_26935: PS417_26935 - phosphonate ABC transporter substrate-binding protein, at 5,816,442 to 5,817,455
_26935
PS417_26940: PS417_26940 - phosphonate ABC transporter permease, at 5,817,478 to 5,819,190
_26940
PS417_26945: PS417_26945 - sulfate ABC transporter ATP-binding protein, at 5,819,192 to 5,820,256
_26945
Position (kb) 5817
5818
5819
5820 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5816.617 kb on + strand, within PS417_26935 at 5816.618 kb on - strand, within PS417_26935 at 5816.890 kb on + strand, within PS417_26935 at 5816.890 kb on + strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5817.163 kb on + strand, within PS417_26935 at 5817.163 kb on + strand, within PS417_26935 at 5817.373 kb on + strand at 5817.374 kb on - strand at 5817.668 kb on + strand, within PS417_26940 at 5817.717 kb on - strand, within PS417_26940 at 5817.780 kb on - strand, within PS417_26940 at 5817.959 kb on + strand, within PS417_26940 at 5817.959 kb on + strand, within PS417_26940 at 5817.960 kb on - strand, within PS417_26940 at 5818.283 kb on + strand, within PS417_26940 at 5818.283 kb on + strand, within PS417_26940 at 5818.464 kb on - strand, within PS417_26940 at 5818.464 kb on - strand, within PS417_26940 at 5818.488 kb on - strand, within PS417_26940 at 5818.541 kb on - strand, within PS417_26940 at 5818.588 kb on - strand, within PS417_26940 at 5818.588 kb on - strand, within PS417_26940 at 5818.588 kb on - strand, within PS417_26940 at 5818.590 kb on + strand, within PS417_26940 at 5818.703 kb on + strand, within PS417_26940 at 5818.704 kb on - strand, within PS417_26940 at 5818.704 kb on - strand, within PS417_26940 at 5818.740 kb on - strand, within PS417_26940 at 5818.740 kb on - strand, within PS417_26940 at 5818.740 kb on - strand, within PS417_26940 at 5818.743 kb on + strand, within PS417_26940 at 5818.743 kb on + strand, within PS417_26940 at 5818.743 kb on + strand, within PS417_26940 at 5818.743 kb on + strand, within PS417_26940 at 5818.790 kb on + strand, within PS417_26940 at 5818.904 kb on + strand, within PS417_26940 at 5818.905 kb on - strand, within PS417_26940 at 5818.953 kb on + strand, within PS417_26940 at 5819.527 kb on + strand, within PS417_26945 at 5819.527 kb on + strand at 5819.528 kb on - strand, within PS417_26945 at 5819.574 kb on + strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.575 kb on - strand, within PS417_26945 at 5819.595 kb on + strand, within PS417_26945 at 5819.909 kb on + strand, within PS417_26945 at 5819.910 kb on - strand, within PS417_26945 at 5820.052 kb on - strand, within PS417_26945 at 5820.052 kb on - strand, within PS417_26945
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 5,816,617 + PS417_26935 0.17 +0.6 5,816,618 - PS417_26935 0.17 +1.5 5,816,890 + PS417_26935 0.44 +0.3 5,816,890 + PS417_26935 0.44 +0.0 5,816,891 - PS417_26935 0.44 -2.4 5,816,891 - PS417_26935 0.44 -2.1 5,816,891 - PS417_26935 0.44 +0.6 5,817,163 + PS417_26935 0.71 +1.5 5,817,163 + PS417_26935 0.71 -0.8 5,817,373 + +0.8 5,817,374 - +1.4 5,817,668 + PS417_26940 0.11 +0.6 5,817,717 - PS417_26940 0.14 +1.5 5,817,780 - PS417_26940 0.18 -0.5 5,817,959 + PS417_26940 0.28 -0.5 5,817,959 + PS417_26940 0.28 -0.5 5,817,960 - PS417_26940 0.28 -0.4 5,818,283 + PS417_26940 0.47 +0.4 5,818,283 + PS417_26940 0.47 +0.6 5,818,464 - PS417_26940 0.58 -0.9 5,818,464 - PS417_26940 0.58 -1.4 5,818,488 - PS417_26940 0.59 +1.2 5,818,541 - PS417_26940 0.62 -0.1 5,818,588 - PS417_26940 0.65 -0.2 5,818,588 - PS417_26940 0.65 -0.4 5,818,588 - PS417_26940 0.65 +0.1 5,818,590 + PS417_26940 0.65 +1.0 5,818,703 + PS417_26940 0.72 +0.8 5,818,704 - PS417_26940 0.72 -0.4 5,818,704 - PS417_26940 0.72 +1.0 5,818,740 - PS417_26940 0.74 -2.5 5,818,740 - PS417_26940 0.74 +1.6 5,818,740 - PS417_26940 0.74 -0.4 5,818,743 + PS417_26940 0.74 -0.0 5,818,743 + PS417_26940 0.74 +0.0 5,818,743 + PS417_26940 0.74 +1.5 5,818,743 + PS417_26940 0.74 +2.3 5,818,790 + PS417_26940 0.77 +0.5 5,818,904 + PS417_26940 0.83 +0.4 5,818,905 - PS417_26940 0.83 -0.5 5,818,953 + PS417_26940 0.86 +0.7 5,819,527 + PS417_26945 0.31 +2.0 5,819,527 + +0.0 5,819,528 - PS417_26945 0.32 +0.9 5,819,574 + PS417_26945 0.36 -1.9 5,819,575 - PS417_26945 0.36 -1.2 5,819,575 - PS417_26945 0.36 -1.3 5,819,575 - PS417_26945 0.36 -0.2 5,819,575 - PS417_26945 0.36 -1.0 5,819,595 + PS417_26945 0.38 +1.5 5,819,909 + PS417_26945 0.67 -0.1 5,819,910 - PS417_26945 0.67 -0.6 5,820,052 - PS417_26945 0.81 -0.9 5,820,052 - PS417_26945 0.81 +1.3
Or see this region's nucleotide sequence