Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26675 and PS417_26680 are separated by 77 nucleotides PS417_26680 and PS417_26685 are separated by 67 nucleotides PS417_26685 and PS417_26690 overlap by 1 nucleotides
PS417_26675: PS417_26675 - glutathione synthetase, at 5,767,215 to 5,768,168
_26675
PS417_26680: PS417_26680 - energy transducer TonB, at 5,768,246 to 5,769,151
_26680
PS417_26685: PS417_26685 - hypothetical protein, at 5,769,219 to 5,769,788
_26685
PS417_26690: PS417_26690 - Holliday junction resolvase, at 5,769,788 to 5,770,225
_26690
Position (kb)
5768
5769
5770 Strain fitness (log2 ratio)
-2
-1
0
1 at 5768.169 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.171 kb on + strand at 5768.172 kb on - strand at 5768.172 kb on - strand at 5768.172 kb on - strand at 5768.172 kb on - strand at 5769.309 kb on + strand, within PS417_26685 at 5769.444 kb on + strand, within PS417_26685 at 5769.580 kb on + strand, within PS417_26685
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 5,768,169 + +0.7 5,768,171 + -1.7 5,768,171 + -0.5 5,768,171 + +0.3 5,768,171 + +0.9 5,768,171 + -0.2 5,768,172 - -2.2 5,768,172 - -1.9 5,768,172 - -1.7 5,768,172 - +0.2 5,769,309 + PS417_26685 0.16 -1.9 5,769,444 + PS417_26685 0.39 -1.8 5,769,580 + PS417_26685 0.63 +1.0
Or see this region's nucleotide sequence