Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21725 and PS417_21730 are separated by 27 nucleotides PS417_21730 and PS417_21735 are separated by 1 nucleotides PS417_21735 and PS417_21740 overlap by 4 nucleotides
PS417_21725: PS417_21725 - amino acid transporter, at 4,718,208 to 4,718,972
_21725
PS417_21730: PS417_21730 - peptidase M14, at 4,719,000 to 4,720,112
_21730
PS417_21735: PS417_21735 - ABC transporter for L-Arginine, permease component 2 (from data) , at 4,720,114 to 4,720,812
_21735
PS417_21740: PS417_21740 - ABC transporter for L-Arginine, permease component 1 (from data) , at 4,720,809 to 4,721,498
_21740
Position (kb)
4718
4719
4720
4721 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4718.094 kb on - strand at 4718.101 kb on + strand at 4718.181 kb on + strand at 4718.182 kb on - strand at 4718.182 kb on - strand at 4718.209 kb on + strand at 4718.525 kb on + strand, within PS417_21725 at 4718.525 kb on + strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.546 kb on + strand, within PS417_21725 at 4718.547 kb on - strand, within PS417_21725 at 4718.942 kb on + strand at 4718.968 kb on + strand at 4718.969 kb on - strand at 4719.200 kb on + strand, within PS417_21730 at 4719.201 kb on - strand, within PS417_21730 at 4719.209 kb on - strand, within PS417_21730 at 4719.209 kb on - strand, within PS417_21730 at 4719.401 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.581 kb on - strand, within PS417_21730 at 4719.581 kb on - strand, within PS417_21730 at 4720.019 kb on - strand at 4720.019 kb on - strand at 4720.090 kb on - strand at 4720.200 kb on - strand, within PS417_21735 at 4720.200 kb on - strand, within PS417_21735 at 4720.200 kb on - strand, within PS417_21735 at 4720.218 kb on + strand, within PS417_21735 at 4720.219 kb on - strand, within PS417_21735 at 4720.220 kb on + strand, within PS417_21735 at 4720.220 kb on + strand, within PS417_21735 at 4720.220 kb on + strand, within PS417_21735 at 4720.221 kb on - strand, within PS417_21735 at 4720.221 kb on - strand, within PS417_21735 at 4720.221 kb on - strand, within PS417_21735 at 4720.239 kb on - strand, within PS417_21735 at 4720.335 kb on + strand, within PS417_21735 at 4720.389 kb on - strand, within PS417_21735 at 4720.395 kb on + strand, within PS417_21735 at 4720.396 kb on - strand, within PS417_21735 at 4720.396 kb on - strand, within PS417_21735 at 4720.396 kb on - strand, within PS417_21735 at 4720.396 kb on - strand, within PS417_21735 at 4720.396 kb on - strand, within PS417_21735 at 4720.481 kb on + strand, within PS417_21735 at 4720.590 kb on - strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.634 kb on + strand, within PS417_21735 at 4720.635 kb on - strand, within PS417_21735 at 4720.635 kb on - strand, within PS417_21735 at 4720.635 kb on - strand, within PS417_21735 at 4720.640 kb on + strand, within PS417_21735 at 4720.799 kb on + strand at 4720.800 kb on - strand at 4720.800 kb on - strand at 4720.813 kb on - strand at 4720.828 kb on - strand at 4720.841 kb on - strand at 4720.894 kb on + strand, within PS417_21740 at 4720.895 kb on - strand, within PS417_21740
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,718,094 - +0.6 4,718,101 + -1.5 4,718,181 + -2.3 4,718,182 - +0.6 4,718,182 - +2.2 4,718,209 + -1.4 4,718,525 + PS417_21725 0.41 -0.9 4,718,525 + PS417_21725 0.41 -0.2 4,718,526 - PS417_21725 0.42 +0.3 4,718,526 - PS417_21725 0.42 +0.8 4,718,526 - PS417_21725 0.42 +1.5 4,718,546 + PS417_21725 0.44 -0.3 4,718,547 - PS417_21725 0.44 +0.5 4,718,942 + +2.0 4,718,968 + -0.0 4,718,969 - -0.4 4,719,200 + PS417_21730 0.18 -0.2 4,719,201 - PS417_21730 0.18 +1.2 4,719,209 - PS417_21730 0.19 -0.2 4,719,209 - PS417_21730 0.19 +2.5 4,719,401 + PS417_21730 0.36 -2.9 4,719,580 + PS417_21730 0.52 +1.6 4,719,580 + PS417_21730 0.52 +1.4 4,719,580 + PS417_21730 0.52 -0.2 4,719,581 - PS417_21730 0.52 +0.5 4,719,581 - PS417_21730 0.52 -1.4 4,720,019 - -1.0 4,720,019 - +0.1 4,720,090 - +0.5 4,720,200 - PS417_21735 0.12 +0.3 4,720,200 - PS417_21735 0.12 -0.5 4,720,200 - PS417_21735 0.12 +0.2 4,720,218 + PS417_21735 0.15 +2.2 4,720,219 - PS417_21735 0.15 -1.3 4,720,220 + PS417_21735 0.15 +0.3 4,720,220 + PS417_21735 0.15 +0.4 4,720,220 + PS417_21735 0.15 -0.4 4,720,221 - PS417_21735 0.15 -0.0 4,720,221 - PS417_21735 0.15 -0.3 4,720,221 - PS417_21735 0.15 +0.3 4,720,239 - PS417_21735 0.18 -1.0 4,720,335 + PS417_21735 0.32 -2.0 4,720,389 - PS417_21735 0.39 +0.4 4,720,395 + PS417_21735 0.40 -1.7 4,720,396 - PS417_21735 0.40 +1.2 4,720,396 - PS417_21735 0.40 -0.0 4,720,396 - PS417_21735 0.40 +1.5 4,720,396 - PS417_21735 0.40 -0.8 4,720,396 - PS417_21735 0.40 +0.0 4,720,481 + PS417_21735 0.53 +1.5 4,720,590 - PS417_21735 0.68 +0.6 4,720,634 + PS417_21735 0.74 -0.1 4,720,634 + PS417_21735 0.74 -1.4 4,720,634 + PS417_21735 0.74 -0.1 4,720,634 + PS417_21735 0.74 -0.5 4,720,634 + PS417_21735 0.74 +0.4 4,720,634 + PS417_21735 0.74 -0.3 4,720,635 - PS417_21735 0.75 +1.0 4,720,635 - PS417_21735 0.75 -0.1 4,720,635 - PS417_21735 0.75 -2.6 4,720,640 + PS417_21735 0.75 +0.3 4,720,799 + -1.1 4,720,800 - -0.5 4,720,800 - +1.7 4,720,813 - -0.9 4,720,828 - -1.2 4,720,841 - -1.1 4,720,894 + PS417_21740 0.12 -1.1 4,720,895 - PS417_21740 0.12 +0.3
Or see this region's nucleotide sequence