Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21705 and PS417_21710 are separated by 245 nucleotides PS417_21710 and PS417_21715 are separated by 309 nucleotides
PS417_21705: PS417_21705 - arginine N-succinyltransferase, at 4,708,253 to 4,709,272
_21705
PS417_21710: PS417_21710 - Succinylornithine transaminase (EC 2.6.1.81) (from data) , at 4,709,518 to 4,710,738
_21710
PS417_21715: PS417_21715 - hypothetical protein, at 4,711,048 to 4,716,966
_21715
Position (kb)
4709
4710
4711 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4708.524 kb on + strand, within PS417_21705 at 4708.525 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.633 kb on - strand, within PS417_21705 at 4708.708 kb on - strand, within PS417_21705 at 4709.010 kb on + strand, within PS417_21705 at 4709.011 kb on - strand, within PS417_21705 at 4710.220 kb on - strand, within PS417_21710 at 4710.222 kb on - strand, within PS417_21710 at 4710.270 kb on - strand, within PS417_21710 at 4710.270 kb on - strand, within PS417_21710 at 4710.270 kb on - strand, within PS417_21710 at 4710.632 kb on - strand at 4710.678 kb on - strand at 4710.678 kb on - strand at 4710.681 kb on + strand at 4710.682 kb on - strand at 4710.794 kb on + strand at 4710.794 kb on + strand at 4710.795 kb on - strand at 4710.840 kb on - strand at 4710.840 kb on - strand at 4710.870 kb on - strand at 4710.958 kb on + strand at 4710.958 kb on + strand at 4710.974 kb on - strand at 4710.977 kb on + strand at 4710.977 kb on + strand at 4710.977 kb on + strand at 4710.977 kb on + strand at 4710.978 kb on - strand at 4710.981 kb on + strand at 4710.982 kb on - strand at 4710.982 kb on - strand at 4711.014 kb on - strand at 4711.014 kb on - strand at 4711.042 kb on - strand at 4711.381 kb on + strand at 4711.382 kb on - strand at 4711.382 kb on - strand at 4711.393 kb on + strand at 4711.393 kb on + strand at 4711.393 kb on + strand at 4711.395 kb on + strand at 4711.395 kb on + strand at 4711.395 kb on + strand at 4711.396 kb on - strand at 4711.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,708,524 + PS417_21705 0.27 -2.7 4,708,525 - PS417_21705 0.27 -0.4 4,708,633 - PS417_21705 0.37 -1.8 4,708,633 - PS417_21705 0.37 -3.5 4,708,633 - PS417_21705 0.37 -0.3 4,708,633 - PS417_21705 0.37 -1.2 4,708,633 - PS417_21705 0.37 +0.1 4,708,708 - PS417_21705 0.45 +0.2 4,709,010 + PS417_21705 0.74 -2.6 4,709,011 - PS417_21705 0.74 -2.8 4,710,220 - PS417_21710 0.57 -1.6 4,710,222 - PS417_21710 0.58 -2.7 4,710,270 - PS417_21710 0.62 -3.4 4,710,270 - PS417_21710 0.62 -0.8 4,710,270 - PS417_21710 0.62 -0.7 4,710,632 - -2.5 4,710,678 - -1.9 4,710,678 - -1.3 4,710,681 + -3.2 4,710,682 - -2.8 4,710,794 + -2.5 4,710,794 + -2.4 4,710,795 - -0.7 4,710,840 - -0.6 4,710,840 - +0.8 4,710,870 - -2.3 4,710,958 + -1.5 4,710,958 + -1.3 4,710,974 - -0.8 4,710,977 + -1.0 4,710,977 + -0.9 4,710,977 + -0.8 4,710,977 + -0.8 4,710,978 - -0.1 4,710,981 + -2.2 4,710,982 - +1.5 4,710,982 - +1.0 4,711,014 - -1.2 4,711,014 - -1.2 4,711,042 - +0.5 4,711,381 + -1.0 4,711,382 - +1.6 4,711,382 - +0.4 4,711,393 + -1.5 4,711,393 + +0.7 4,711,393 + -1.7 4,711,395 + -1.5 4,711,395 + -0.1 4,711,395 + -0.4 4,711,396 - +1.2 4,711,634 - -1.3
Or see this region's nucleotide sequence