Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21690 and PS417_21695 are separated by 152 nucleotides PS417_21695 and PS417_21700 overlap by 1 nucleotides
PS417_21690: PS417_21690 - N-succinylarginine dihydrolase, at 4,704,211 to 4,705,557
_21690
PS417_21695: PS417_21695 - succinylglutamate-semialdehyde dehydrogenase, at 4,705,710 to 4,707,176
_21695
PS417_21700: PS417_21700 - arginine N-succinyltransferase, at 4,707,176 to 4,708,201
_21700
Position (kb)
4705
4706
4707
4708 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4704.767 kb on + strand, within PS417_21690 at 4704.767 kb on + strand at 4704.767 kb on + strand, within PS417_21690 at 4704.768 kb on - strand, within PS417_21690 at 4704.851 kb on + strand, within PS417_21690 at 4705.089 kb on + strand, within PS417_21690 at 4705.089 kb on + strand, within PS417_21690 at 4705.505 kb on + strand at 4705.505 kb on + strand at 4705.510 kb on - strand at 4705.547 kb on + strand at 4705.587 kb on + strand at 4705.662 kb on + strand at 4705.663 kb on - strand at 4705.663 kb on - strand at 4705.722 kb on + strand at 4705.749 kb on + strand at 4705.807 kb on + strand at 4705.807 kb on + strand at 4705.973 kb on - strand, within PS417_21695 at 4706.364 kb on - strand, within PS417_21695 at 4706.387 kb on - strand, within PS417_21695 at 4706.595 kb on + strand, within PS417_21695 at 4706.840 kb on - strand, within PS417_21695 at 4707.163 kb on + strand at 4707.164 kb on - strand at 4707.164 kb on - strand at 4707.463 kb on - strand, within PS417_21700 at 4707.631 kb on - strand, within PS417_21700 at 4707.901 kb on + strand, within PS417_21700 at 4707.901 kb on + strand, within PS417_21700 at 4707.902 kb on - strand, within PS417_21700 at 4707.948 kb on + strand, within PS417_21700
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,704,767 + PS417_21690 0.41 -2.6 4,704,767 + +2.4 4,704,767 + PS417_21690 0.41 -2.1 4,704,768 - PS417_21690 0.41 -2.7 4,704,851 + PS417_21690 0.48 -2.6 4,705,089 + PS417_21690 0.65 -3.4 4,705,089 + PS417_21690 0.65 -3.3 4,705,505 + -2.9 4,705,505 + -3.3 4,705,510 - -4.2 4,705,547 + -2.9 4,705,587 + -2.8 4,705,662 + -2.8 4,705,663 - -0.2 4,705,663 - -0.8 4,705,722 + +1.1 4,705,749 + -0.0 4,705,807 + -3.8 4,705,807 + -3.2 4,705,973 - PS417_21695 0.18 -4.7 4,706,364 - PS417_21695 0.45 -3.2 4,706,387 - PS417_21695 0.46 -0.4 4,706,595 + PS417_21695 0.60 -3.0 4,706,840 - PS417_21695 0.77 -0.1 4,707,163 + +1.4 4,707,164 - -1.1 4,707,164 - -3.1 4,707,463 - PS417_21700 0.28 -0.4 4,707,631 - PS417_21700 0.44 -0.9 4,707,901 + PS417_21700 0.71 -1.8 4,707,901 + PS417_21700 0.71 -2.1 4,707,902 - PS417_21700 0.71 -0.9 4,707,948 + PS417_21700 0.75 -3.0
Or see this region's nucleotide sequence