Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17745 and PS417_17750 are separated by 48 nucleotides PS417_17750 and PS417_17755 are separated by 125 nucleotides
PS417_17745: PS417_17745 - gluconolactonase, at 3,873,127 to 3,874,227
_17745
PS417_17750: PS417_17750 - hypothetical protein, at 3,874,276 to 3,875,718
_17750
PS417_17755: PS417_17755 - hypothetical protein, at 3,875,844 to 3,876,197
_17755
Position (kb)
3874
3875
3876 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3873.550 kb on - strand, within PS417_17745 at 3873.613 kb on + strand, within PS417_17745 at 3873.619 kb on + strand, within PS417_17745 at 3873.620 kb on - strand, within PS417_17745 at 3874.117 kb on + strand, within PS417_17745 at 3874.144 kb on + strand at 3874.225 kb on + strand at 3874.260 kb on + strand at 3874.260 kb on + strand at 3874.260 kb on + strand at 3874.261 kb on - strand at 3874.261 kb on - strand at 3874.264 kb on + strand at 3874.264 kb on + strand at 3874.264 kb on + strand at 3874.265 kb on - strand at 3874.320 kb on - strand at 3874.371 kb on + strand at 3874.410 kb on - strand at 3874.633 kb on - strand, within PS417_17750 at 3874.672 kb on + strand, within PS417_17750 at 3874.923 kb on - strand, within PS417_17750 at 3875.058 kb on - strand, within PS417_17750 at 3875.129 kb on + strand, within PS417_17750 at 3875.129 kb on + strand, within PS417_17750 at 3875.130 kb on - strand, within PS417_17750 at 3875.136 kb on - strand, within PS417_17750 at 3875.139 kb on - strand, within PS417_17750 at 3875.361 kb on - strand, within PS417_17750 at 3875.697 kb on + strand at 3875.733 kb on + strand at 3875.734 kb on - strand at 3875.734 kb on - strand at 3875.782 kb on + strand at 3875.782 kb on + strand at 3875.821 kb on - strand at 3875.900 kb on - strand, within PS417_17755 at 3875.928 kb on + strand, within PS417_17755 at 3876.024 kb on - strand, within PS417_17755 at 3876.178 kb on + strand at 3876.281 kb on + strand at 3876.389 kb on + strand at 3876.390 kb on - strand at 3876.390 kb on - strand at 3876.459 kb on + strand at 3876.552 kb on + strand at 3876.552 kb on + strand at 3876.553 kb on - strand at 3876.553 kb on - strand at 3876.553 kb on - strand at 3876.636 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 3,873,550 - PS417_17745 0.38 -1.6 3,873,613 + PS417_17745 0.44 -0.7 3,873,619 + PS417_17745 0.45 +0.0 3,873,620 - PS417_17745 0.45 -0.5 3,874,117 + PS417_17745 0.90 -2.5 3,874,144 + -2.5 3,874,225 + +0.0 3,874,260 + +1.0 3,874,260 + -1.9 3,874,260 + -0.5 3,874,261 - -1.4 3,874,261 - +0.6 3,874,264 + -0.4 3,874,264 + -1.4 3,874,264 + +0.3 3,874,265 - +0.8 3,874,320 - -0.6 3,874,371 + +0.3 3,874,410 - -1.8 3,874,633 - PS417_17750 0.25 -0.9 3,874,672 + PS417_17750 0.27 +0.0 3,874,923 - PS417_17750 0.45 -1.5 3,875,058 - PS417_17750 0.54 +3.0 3,875,129 + PS417_17750 0.59 -3.2 3,875,129 + PS417_17750 0.59 -1.0 3,875,130 - PS417_17750 0.59 -2.0 3,875,136 - PS417_17750 0.60 -0.5 3,875,139 - PS417_17750 0.60 +0.6 3,875,361 - PS417_17750 0.75 -1.7 3,875,697 + -0.6 3,875,733 + -0.3 3,875,734 - -0.4 3,875,734 - +0.0 3,875,782 + -0.7 3,875,782 + -0.7 3,875,821 - -0.4 3,875,900 - PS417_17755 0.16 -0.5 3,875,928 + PS417_17755 0.24 +0.9 3,876,024 - PS417_17755 0.51 +0.8 3,876,178 + -0.3 3,876,281 + -0.0 3,876,389 + +1.3 3,876,390 - -0.1 3,876,390 - -0.5 3,876,459 + -0.5 3,876,552 + +0.0 3,876,552 + -1.0 3,876,553 - -1.1 3,876,553 - +1.6 3,876,553 - +0.7 3,876,636 + -1.1
Or see this region's nucleotide sequence