Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12355 and PS417_12360 are separated by 53 nucleotides PS417_12360 and PS417_12365 are separated by 114 nucleotides PS417_12365 and PS417_12370 are separated by 144 nucleotides
PS417_12355: PS417_12355 - magnesium chelatase, at 2,688,136 to 2,689,134
_12355
PS417_12360: PS417_12360 - magnesium chelatase, at 2,689,188 to 2,689,790
_12360
PS417_12365: PS417_12365 - cobalt chelatase, at 2,689,905 to 2,690,852
_12365
PS417_12370: PS417_12370 - inorganic polyphosphate kinase, at 2,690,997 to 2,691,887
_12370
Position (kb)
2689
2690
2691 Strain fitness (log2 ratio)
-2
-1
0
1 at 2688.939 kb on + strand, within PS417_12355 at 2688.940 kb on - strand, within PS417_12355 at 2689.294 kb on - strand, within PS417_12360 at 2689.775 kb on + strand at 2689.789 kb on - strand at 2689.890 kb on + strand at 2689.891 kb on - strand at 2689.891 kb on - strand at 2690.240 kb on - strand, within PS417_12365 at 2690.283 kb on + strand, within PS417_12365 at 2690.283 kb on + strand, within PS417_12365 at 2690.284 kb on - strand, within PS417_12365 at 2690.284 kb on - strand, within PS417_12365 at 2690.284 kb on - strand, within PS417_12365 at 2690.441 kb on - strand, within PS417_12365 at 2690.599 kb on + strand, within PS417_12365 at 2690.600 kb on - strand, within PS417_12365 at 2690.872 kb on - strand at 2690.897 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 2,688,939 + PS417_12355 0.80 -0.8 2,688,940 - PS417_12355 0.80 -1.4 2,689,294 - PS417_12360 0.18 -0.8 2,689,775 + -0.3 2,689,789 - -0.5 2,689,890 + +0.4 2,689,891 - +0.2 2,689,891 - -2.3 2,690,240 - PS417_12365 0.35 -1.6 2,690,283 + PS417_12365 0.40 -2.1 2,690,283 + PS417_12365 0.40 -0.1 2,690,284 - PS417_12365 0.40 -1.8 2,690,284 - PS417_12365 0.40 -0.4 2,690,284 - PS417_12365 0.40 +0.4 2,690,441 - PS417_12365 0.57 -1.6 2,690,599 + PS417_12365 0.73 -0.8 2,690,600 - PS417_12365 0.73 -1.9 2,690,872 - +0.2 2,690,897 + -0.0
Or see this region's nucleotide sequence