Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_17150 and PS417_17155 are separated by 114 nucleotides PS417_17155 and PS417_17160 overlap by 11 nucleotides PS417_17160 and PS417_17165 are separated by 57 nucleotides
PS417_17150: PS417_17150 - phosphonoacetaldehyde hydrolase, at 3,745,056 to 3,745,883
_17150
PS417_17155: PS417_17155 - cytochrome B561, at 3,745,998 to 3,746,555
_17155
PS417_17160: PS417_17160 - 1-aminocyclopropane-1-carboxylate deaminase, at 3,746,545 to 3,747,429
_17160
PS417_17165: PS417_17165 - 2,4-dienoyl-CoA reductase, at 3,747,487 to 3,749,526
_17165
Position (kb)
3746
3747
3748 Strain fitness (log2 ratio)
-1
0
1
2 at 3745.707 kb on + strand, within PS417_17150 at 3745.707 kb on + strand, within PS417_17150 at 3745.707 kb on + strand, within PS417_17150 at 3745.708 kb on - strand, within PS417_17150 at 3745.794 kb on + strand, within PS417_17150 at 3745.794 kb on + strand, within PS417_17150 at 3745.941 kb on - strand at 3746.025 kb on + strand at 3746.082 kb on + strand, within PS417_17155 at 3746.083 kb on - strand, within PS417_17155 at 3746.083 kb on - strand, within PS417_17155 at 3746.099 kb on - strand, within PS417_17155 at 3746.361 kb on + strand, within PS417_17155 at 3746.666 kb on + strand, within PS417_17160 at 3746.667 kb on - strand, within PS417_17160 at 3746.785 kb on + strand, within PS417_17160 at 3747.722 kb on + strand, within PS417_17165 at 3748.061 kb on + strand, within PS417_17165 at 3748.062 kb on - strand, within PS417_17165 at 3748.062 kb on - strand, within PS417_17165 at 3748.227 kb on - strand, within PS417_17165 at 3748.415 kb on + strand, within PS417_17165
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 3,745,707 + PS417_17150 0.79 -0.3 3,745,707 + PS417_17150 0.79 +2.0 3,745,707 + PS417_17150 0.79 -0.6 3,745,708 - PS417_17150 0.79 -0.6 3,745,794 + PS417_17150 0.89 -1.3 3,745,794 + PS417_17150 0.89 +0.2 3,745,941 - +1.4 3,746,025 + +0.9 3,746,082 + PS417_17155 0.15 +0.3 3,746,083 - PS417_17155 0.15 -0.5 3,746,083 - PS417_17155 0.15 +0.8 3,746,099 - PS417_17155 0.18 +1.4 3,746,361 + PS417_17155 0.65 -0.4 3,746,666 + PS417_17160 0.14 -0.3 3,746,667 - PS417_17160 0.14 -1.0 3,746,785 + PS417_17160 0.27 -0.8 3,747,722 + PS417_17165 0.12 -0.3 3,748,061 + PS417_17165 0.28 +0.8 3,748,062 - PS417_17165 0.28 -0.3 3,748,062 - PS417_17165 0.28 +0.2 3,748,227 - PS417_17165 0.36 +1.0 3,748,415 + PS417_17165 0.45 -0.1
Or see this region's nucleotide sequence