Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00905 and PS417_00910 are separated by 2 nucleotides PS417_00910 and PS417_00915 are separated by 188 nucleotides
PS417_00905: PS417_00905 - histidine kinase, at 202,271 to 203,479
_00905
PS417_00910: PS417_00910 - diguanylate cyclase, at 203,482 to 204,483
_00910
PS417_00915: PS417_00915 - aminotransferase, at 204,672 to 205,856
_00915
Position (kb) 203
204
205 Strain fitness (log2 ratio) -2
-1
0
1 at 202.679 kb on + strand, within PS417_00905 at 202.679 kb on + strand, within PS417_00905 at 202.940 kb on - strand, within PS417_00905 at 203.117 kb on + strand, within PS417_00905 at 203.228 kb on + strand, within PS417_00905 at 203.229 kb on - strand, within PS417_00905 at 203.246 kb on + strand, within PS417_00905 at 203.246 kb on + strand, within PS417_00905 at 203.247 kb on - strand, within PS417_00905 at 203.352 kb on + strand, within PS417_00905 at 203.525 kb on + strand at 203.526 kb on - strand at 203.526 kb on - strand at 203.630 kb on + strand, within PS417_00910 at 203.631 kb on - strand, within PS417_00910 at 203.787 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.071 kb on + strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.072 kb on - strand, within PS417_00910 at 204.179 kb on + strand, within PS417_00910 at 204.180 kb on - strand, within PS417_00910 at 204.266 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.281 kb on + strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.282 kb on - strand, within PS417_00910 at 204.531 kb on - strand at 204.573 kb on + strand at 204.597 kb on - strand at 204.640 kb on + strand at 204.697 kb on + strand at 204.786 kb on - strand at 205.395 kb on - strand, within PS417_00915 at 205.468 kb on + strand, within PS417_00915
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 remove 202,679 + PS417_00905 0.34 +0.5 202,679 + PS417_00905 0.34 -0.1 202,940 - PS417_00905 0.55 +0.1 203,117 + PS417_00905 0.70 -0.5 203,228 + PS417_00905 0.79 +0.7 203,229 - PS417_00905 0.79 -0.5 203,246 + PS417_00905 0.81 +0.0 203,246 + PS417_00905 0.81 +0.3 203,247 - PS417_00905 0.81 -0.8 203,352 + PS417_00905 0.89 -0.7 203,525 + -1.1 203,526 - -1.5 203,526 - +1.0 203,630 + PS417_00910 0.15 -0.6 203,631 - PS417_00910 0.15 +0.3 203,787 + PS417_00910 0.30 -0.5 204,071 + PS417_00910 0.59 -0.1 204,071 + PS417_00910 0.59 -0.4 204,072 - PS417_00910 0.59 +0.3 204,072 - PS417_00910 0.59 -0.4 204,072 - PS417_00910 0.59 -2.0 204,179 + PS417_00910 0.70 -0.0 204,180 - PS417_00910 0.70 -1.1 204,266 + PS417_00910 0.78 -0.3 204,281 + PS417_00910 0.80 -1.0 204,281 + PS417_00910 0.80 -0.2 204,282 - PS417_00910 0.80 -0.7 204,282 - PS417_00910 0.80 -0.4 204,282 - PS417_00910 0.80 -0.9 204,531 - +0.8 204,573 + -0.8 204,597 - -0.7 204,640 + -0.1 204,697 + +1.7 204,786 - -1.0 205,395 - PS417_00915 0.61 +0.3 205,468 + PS417_00915 0.67 +0.2
Or see this region's nucleotide sequence