Strain Fitness in Pseudomonas simiae WCS417 around PS417_20105

Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
4,359,916	+		PS417_20095	0.85	-0.3
4,359,917	-		PS417_20095	0.85	-6.8
4,359,917	-		PS417_20095	0.85	-2.0
4,360,105	+				+0.8
4,360,105	+				-2.5
4,360,106	-				-3.1
4,360,116	+				+1.1
4,360,116	+				+0.4
4,360,117	-				-2.4
4,360,117	-				-0.3
4,360,117	-				-0.3
4,360,118	+				-0.3
4,360,118	+				+0.4
4,360,119	-				-1.2
4,360,119	-				-4.8
4,360,178	-		PS417_20100	0.11	-2.8
4,360,233	+		PS417_20100	0.18	-0.3
4,360,233	+		PS417_20100	0.18	+1.9
4,360,298	-		PS417_20100	0.26	-0.8
4,360,298	-		PS417_20100	0.26	-4.0
4,360,319	+		PS417_20100	0.29	+1.3
4,360,320	-		PS417_20100	0.29	-2.8
4,360,320	-		PS417_20100	0.29	-1.3
4,360,323	+		PS417_20100	0.30	+0.1
4,360,424	-		PS417_20100	0.42	-3.2
4,360,495	+		PS417_20100	0.51	-0.7
4,360,495	+		PS417_20100	0.51	-0.9
4,360,495	+		PS417_20100	0.51	+0.0
4,360,496	-		PS417_20100	0.51	-3.7
4,360,496	-		PS417_20100	0.51	-2.7
4,360,496	-		PS417_20100	0.51	-4.7
4,360,498	+		PS417_20100	0.52	-0.9
4,360,498	+		PS417_20100	0.52	-1.2
4,360,498	+		PS417_20100	0.52	-0.3
4,360,499	-		PS417_20100	0.52	-4.2
4,360,561	-		PS417_20100	0.60	-3.7
4,360,561	-		PS417_20100	0.60	-4.4
4,360,561	-		PS417_20100	0.60	-3.0
4,360,562	+		PS417_20100	0.60	-1.3
4,360,563	-		PS417_20100	0.60	-3.2
4,360,612	-		PS417_20100	0.66	-6.4
4,360,669	+		PS417_20100	0.73	-0.4
4,360,670	-		PS417_20100	0.73	-2.8
4,360,670	-		PS417_20100	0.73	-2.1
4,360,670	-		PS417_20100	0.73	-2.6
4,360,670	-		PS417_20100	0.73	-0.5
4,360,689	+		PS417_20100	0.76	+0.1
4,360,851	+				-1.7
4,360,852	-				-4.2
4,360,940	+				-4.3
4,360,940	+				-5.5
4,360,940	+				-2.0
4,361,007	+				-5.2
4,361,007	+				-7.9
4,361,007	+				-4.4
4,361,007	+				-4.2
4,361,008	-				-5.2
4,361,162	+				-4.8
4,361,163	-				-2.7
4,361,163	-				-5.4
4,361,239	+				-7.3
4,361,240	-				-5.0
4,361,240	-				-3.8
4,361,245	+				-4.6
4,361,246	-				-4.2
4,361,325	+		PS417_20105	0.10	-1.2
4,361,326	-		PS417_20105	0.10	-4.8
4,361,407	+		PS417_20105	0.12	-4.0
4,361,407	+		PS417_20105	0.12	-3.5
4,361,455	+		PS417_20105	0.13	-2.0
4,361,455	+		PS417_20105	0.13	-5.8
4,361,456	-		PS417_20105	0.13	-3.1
4,361,544	+		PS417_20105	0.15	-0.8
4,361,545	-		PS417_20105	0.15	-3.0
4,361,602	+		PS417_20105	0.17	-2.8
4,361,603	-		PS417_20105	0.17	-5.0
4,361,603	-		PS417_20105	0.17	-3.6
4,361,666	+		PS417_20105	0.18	-4.6
4,361,666	+		PS417_20105	0.18	-4.0
4,361,666	+		PS417_20105	0.18	-6.5
4,361,667	-		PS417_20105	0.18	-3.2
4,361,739	+		PS417_20105	0.20	-6.1
4,361,780	-		PS417_20105	0.21	-3.3
4,361,820	+		PS417_20105	0.22	-4.8
4,361,885	+		PS417_20105	0.23	-3.9
4,361,949	+		PS417_20105	0.25	-8.5
4,361,949	+		PS417_20105	0.25	-3.5
4,361,950	-		PS417_20105	0.25	-3.5
4,361,951	+		PS417_20105	0.25	-4.3
4,361,951	+		PS417_20105	0.25	-4.0
4,361,951	+		PS417_20105	0.25	-3.2
4,361,951	+		PS417_20105	0.25	-2.2
4,361,952	-		PS417_20105	0.25	-8.7
4,361,952	-		PS417_20105	0.25	-6.1
4,361,952	-		PS417_20105	0.25	-3.4
4,361,952	-				-0.9
4,361,952	-		PS417_20105	0.25	-8.1
4,361,952	-		PS417_20105	0.25	-2.7
4,361,955	+				-0.9
4,361,956	-		PS417_20105	0.25	-5.2
4,361,985	+				-1.3
4,361,985	+		PS417_20105	0.25	-3.9
4,361,985	+		PS417_20105	0.25	+0.1
4,361,986	-		PS417_20105	0.25	-3.0
4,361,986	-		PS417_20105	0.25	-3.4
4,362,017	+		PS417_20105	0.26	-4.6
4,362,018	-		PS417_20105	0.26	-5.8
4,362,073	-		PS417_20105	0.27	-5.3
4,362,073	-		PS417_20105	0.27	-3.9
4,362,073	-				-1.2
4,362,218	+		PS417_20105	0.31	-5.3
4,362,218	+		PS417_20105	0.31	-7.1
4,362,642	+		PS417_20105	0.41	-4.6
4,362,643	-		PS417_20105	0.41	-2.2
4,362,643	-		PS417_20105	0.41	-6.3
4,362,673	+		PS417_20105	0.41	-2.0
4,362,684	+		PS417_20105	0.42	+1.4
4,362,685	-		PS417_20105	0.42	+0.2
4,362,685	-		PS417_20105	0.42	-5.8
4,362,720	-		PS417_20105	0.42	-3.2
4,362,720	-		PS417_20105	0.42	-4.4
4,362,781	+		PS417_20105	0.44	-3.6
4,362,863	+		PS417_20105	0.46	+2.3
4,362,864	-		PS417_20105	0.46	-4.5
4,362,906	+		PS417_20105	0.47	-3.2
4,362,953	+		PS417_20105	0.48	-6.0
4,362,954	-		PS417_20105	0.48	-2.6
4,362,954	-		PS417_20105	0.48	-1.7
4,363,033	+		PS417_20105	0.50	-3.7
4,363,033	+		PS417_20105	0.50	+0.9
4,363,034	-		PS417_20105	0.50	-4.7
4,363,038	-		PS417_20105	0.50	-1.0
4,363,038	-		PS417_20105	0.50	-6.7
4,363,043	+		PS417_20105	0.50	-4.3
4,363,044	-		PS417_20105	0.50	-3.5
4,363,044	-		PS417_20105	0.50	-5.4
4,363,150	-		PS417_20105	0.52	-3.1
4,363,165	-		PS417_20105	0.53	-5.2
4,363,261	+		PS417_20105	0.55	-3.4
4,363,261	+		PS417_20105	0.55	-5.8
4,363,261	+		PS417_20105	0.55	-3.5
4,363,262	-		PS417_20105	0.55	-1.8
4,363,262	-		PS417_20105	0.55	-3.8
4,363,262	-		PS417_20105	0.55	-3.9
4,363,263	+		PS417_20105	0.55	-1.0
4,363,264	-				-0.0
4,363,264	-		PS417_20105	0.55	-3.5
4,363,264	-		PS417_20105	0.55	-6.3
4,363,445	+		PS417_20105	0.59	-3.8
4,363,480	+		PS417_20105	0.60	-5.5
4,363,480	+		PS417_20105	0.60	-4.3
4,363,542	+		PS417_20105	0.61	-4.2
4,363,542	+		PS417_20105	0.61	-2.5
4,363,543	-		PS417_20105	0.61	-0.9
4,363,548	+		PS417_20105	0.61	-4.1
4,363,549	-		PS417_20105	0.61	-6.3
4,363,549	-		PS417_20105	0.61	-0.7
4,363,549	-		PS417_20105	0.61	-5.9
4,363,575	-		PS417_20105	0.62	-0.9
4,363,575	-		PS417_20105	0.62	-6.0
4,363,575	-		PS417_20105	0.62	-3.6
4,363,589	-		PS417_20105	0.62	-5.6
4,363,589	-		PS417_20105	0.62	-2.3
4,363,619	+		PS417_20105	0.63	-5.9
4,363,813	-		PS417_20105	0.68	-4.6
4,363,826	+		PS417_20105	0.68	-3.4
4,363,827	-		PS417_20105	0.68	-2.8
4,363,857	-		PS417_20105	0.69	-1.2
4,363,857	-		PS417_20105	0.69	-6.1
4,363,902	-		PS417_20105	0.70	-3.0
4,364,009	+		PS417_20105	0.72	-4.9
4,364,010	-		PS417_20105	0.72	-3.3
4,364,010	-		PS417_20105	0.72	-6.0
4,364,010	-		PS417_20105	0.72	-1.4
4,364,010	-		PS417_20105	0.72	-1.4
4,364,010	-		PS417_20105	0.72	-5.3
4,364,151	-		PS417_20105	0.75	-3.7
4,364,151	-		PS417_20105	0.75	-3.7
4,364,189	+				-0.0
4,364,358	+		PS417_20105	0.80	-4.8
4,364,358	+		PS417_20105	0.80	+0.9
4,364,359	-		PS417_20105	0.80	-6.1
4,364,359	-		PS417_20105	0.80	+1.3
4,364,359	-		PS417_20105	0.80	-1.3
4,364,359	-		PS417_20105	0.80	-1.6
4,364,359	-		PS417_20105	0.80	-2.3
4,364,367	+		PS417_20105	0.80	-3.7
4,364,368	-		PS417_20105	0.80	-3.1
4,364,368	-		PS417_20105	0.80	-0.6
4,364,419	+		PS417_20105	0.82	-4.9
4,364,419	+				+0.3
4,364,420	-		PS417_20105	0.82	-5.8
4,364,420	-		PS417_20105	0.82	-5.4
4,364,477	+		PS417_20105	0.83	-4.0
4,364,477	+		PS417_20105	0.83	-2.8
4,364,477	+		PS417_20105	0.83	-5.0
4,364,477	+		PS417_20105	0.83	-4.3
4,364,492	+		PS417_20105	0.83	-3.9
4,364,492	+		PS417_20105	0.83	-3.4
4,364,492	+		PS417_20105	0.83	-4.1
4,364,493	-		PS417_20105	0.83	-3.4
4,364,493	-		PS417_20105	0.83	-6.6
4,364,495	-		PS417_20105	0.83	-4.3
4,364,811	+				-3.7
4,364,821	+				-4.3
4,364,821	+				-4.5
4,364,821	+				-7.4
4,364,821	+				-6.1
4,364,821	+				-1.0
4,364,839	-				-0.0
4,364,846	+				-6.9
4,364,846	+				-2.2
4,364,846	+				-2.0
4,364,847	-				-5.6
4,365,029	+				-4.4
4,365,245	-				-3.9
4,365,328	-				+1.1
4,365,352	+				+0.9
4,365,353	-				+0.1
4,365,353	-				-0.4
4,365,354	+				-1.3
4,365,354	+				+0.1
4,365,354	+				+1.6
4,365,354	+				-2.7
4,365,354	+				-0.9
4,365,354	+				+0.5
4,365,355	-				-1.8
4,365,355	-				-0.9
4,365,373	-				+0.1
4,365,373	-				+0.1
4,365,659	-		PS417_20110	0.31	-2.6
4,365,659	-		PS417_20110	0.31	-0.2
4,365,660	+		PS417_20110	0.31	-0.6
4,365,660	+		PS417_20110	0.31	+0.6
4,365,661	-		PS417_20110	0.31	-0.9
4,365,741	+		PS417_20110	0.39	-1.1
4,365,742	-		PS417_20110	0.39	-0.0
4,365,742	-				-1.3
4,365,797	+		PS417_20110	0.44	-0.3
4,365,798	-		PS417_20110	0.44	-0.3
4,365,980	+		PS417_20110	0.61	-3.5
4,365,980	+		PS417_20110	0.61	-0.3
4,365,980	+		PS417_20110	0.61	-0.1