Experiment: Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5060 and Atu5061 are separated by 16 nucleotides Atu5061 and Atu5062 overlap by 4 nucleotides Atu5062 and Atu5063 are separated by 19 nucleotides
Atu5060: Atu5060 - ABC transporter membrane spanning protein (glycerol-3-phosphate), at 59,128 to 59,937
Atu5060
Atu5061: Atu5061 - glycerophosphoryl diester phosphodiesterase, at 59,954 to 60,703
Atu5061
Atu5062: Atu5062 - ABC transporter nucleotide binding/ATPase (glycerol-3-phosphate), at 60,700 to 61,743
Atu5062
Atu5063: Atu5063 - RpiR family transcriptional regulator, at 61,763 to 62,641
Atu5063
Position (kb) 60
61
62 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6 at 59.760 kb on + strand, within Atu5060 at 59.766 kb on - strand, within Atu5060 at 59.818 kb on - strand, within Atu5060 at 59.843 kb on - strand, within Atu5060 at 59.879 kb on + strand at 59.883 kb on + strand at 59.912 kb on + strand at 59.914 kb on + strand at 59.974 kb on - strand at 60.132 kb on - strand, within Atu5061 at 60.133 kb on - strand, within Atu5061 at 60.133 kb on - strand, within Atu5061 at 60.399 kb on - strand, within Atu5061 at 60.427 kb on + strand, within Atu5061 at 60.541 kb on - strand, within Atu5061 at 60.560 kb on + strand, within Atu5061 at 60.584 kb on + strand, within Atu5061 at 60.592 kb on - strand, within Atu5061 at 60.746 kb on + strand at 60.746 kb on + strand at 60.746 kb on + strand at 60.754 kb on - strand at 60.756 kb on + strand at 60.756 kb on + strand at 60.756 kb on + strand at 60.853 kb on + strand, within Atu5062 at 60.854 kb on + strand, within Atu5062 at 60.878 kb on - strand, within Atu5062 at 60.889 kb on + strand, within Atu5062 at 60.897 kb on - strand, within Atu5062 at 60.960 kb on + strand, within Atu5062 at 61.068 kb on + strand, within Atu5062 at 61.104 kb on + strand, within Atu5062 at 61.111 kb on + strand, within Atu5062 at 61.116 kb on + strand, within Atu5062 at 61.124 kb on - strand, within Atu5062 at 61.156 kb on + strand, within Atu5062 at 61.164 kb on - strand, within Atu5062 at 61.164 kb on - strand, within Atu5062 at 61.221 kb on - strand, within Atu5062 at 61.226 kb on + strand, within Atu5062 at 61.258 kb on + strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.266 kb on - strand, within Atu5062 at 61.271 kb on - strand, within Atu5062 at 61.304 kb on - strand, within Atu5062 at 61.318 kb on + strand, within Atu5062 at 61.441 kb on + strand, within Atu5062 at 61.456 kb on + strand, within Atu5062 at 61.459 kb on - strand, within Atu5062 at 61.474 kb on - strand, within Atu5062 at 61.485 kb on - strand, within Atu5062 at 61.523 kb on + strand, within Atu5062 at 61.523 kb on + strand, within Atu5062 at 61.531 kb on - strand, within Atu5062 at 61.565 kb on + strand, within Atu5062 at 61.565 kb on + strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.573 kb on - strand, within Atu5062 at 61.786 kb on + strand at 61.814 kb on - strand at 61.873 kb on - strand, within Atu5063 at 61.873 kb on - strand, within Atu5063 at 61.916 kb on + strand, within Atu5063 at 61.916 kb on + strand, within Atu5063 at 61.922 kb on + strand, within Atu5063 at 61.930 kb on - strand, within Atu5063 at 61.961 kb on - strand, within Atu5063 at 61.999 kb on - strand, within Atu5063 at 62.057 kb on - strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.093 kb on + strand, within Atu5063 at 62.101 kb on - strand, within Atu5063 at 62.126 kb on + strand, within Atu5063 at 62.126 kb on + strand, within Atu5063 at 62.136 kb on + strand, within Atu5063 at 62.172 kb on + strand, within Atu5063 at 62.225 kb on + strand, within Atu5063 at 62.391 kb on + strand, within Atu5063 at 62.459 kb on + strand, within Atu5063 at 62.493 kb on + strand, within Atu5063 at 62.511 kb on + strand, within Atu5063 at 62.546 kb on + strand, within Atu5063 at 62.625 kb on + strand at 62.625 kb on + strand at 62.663 kb on - strand at 62.666 kb on - strand at 62.699 kb on + strand at 62.718 kb on - strand at 62.733 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct remove 59,760 + Atu5060 0.78 -1.0 59,766 - Atu5060 0.79 -1.6 59,818 - Atu5060 0.85 +0.7 59,843 - Atu5060 0.88 -2.2 59,879 + +1.3 59,883 + -1.6 59,912 + -1.2 59,914 + -1.4 59,974 - -1.7 60,132 - Atu5061 0.24 -0.2 60,133 - Atu5061 0.24 -0.9 60,133 - Atu5061 0.24 -1.1 60,399 - Atu5061 0.59 +1.8 60,427 + Atu5061 0.63 -1.9 60,541 - Atu5061 0.78 +1.2 60,560 + Atu5061 0.81 -1.3 60,584 + Atu5061 0.84 +0.8 60,592 - Atu5061 0.85 -0.9 60,746 + -0.2 60,746 + -1.8 60,746 + -0.6 60,754 - +0.1 60,756 + +0.5 60,756 + +1.1 60,756 + +0.4 60,853 + Atu5062 0.15 -1.9 60,854 + Atu5062 0.15 +0.2 60,878 - Atu5062 0.17 -4.1 60,889 + Atu5062 0.18 +1.3 60,897 - Atu5062 0.19 +0.7 60,960 + Atu5062 0.25 -0.4 61,068 + Atu5062 0.35 +0.2 61,104 + Atu5062 0.39 -0.5 61,111 + Atu5062 0.39 +1.2 61,116 + Atu5062 0.40 +0.8 61,124 - Atu5062 0.41 +0.6 61,156 + Atu5062 0.44 -0.6 61,164 - Atu5062 0.44 +1.0 61,164 - Atu5062 0.44 +1.0 61,221 - Atu5062 0.50 -0.1 61,226 + Atu5062 0.50 -2.2 61,258 + Atu5062 0.53 +2.3 61,266 - Atu5062 0.54 +0.4 61,266 - Atu5062 0.54 -1.1 61,266 - Atu5062 0.54 -3.4 61,266 - Atu5062 0.54 +0.8 61,271 - Atu5062 0.55 -2.4 61,304 - Atu5062 0.58 +0.1 61,318 + Atu5062 0.59 +0.6 61,441 + Atu5062 0.71 +0.6 61,456 + Atu5062 0.72 +0.4 61,459 - Atu5062 0.73 +0.1 61,474 - Atu5062 0.74 -0.4 61,485 - Atu5062 0.75 -0.1 61,523 + Atu5062 0.79 -0.6 61,523 + Atu5062 0.79 -0.4 61,531 - Atu5062 0.80 +1.6 61,565 + Atu5062 0.83 +4.8 61,565 + Atu5062 0.83 -1.8 61,573 - Atu5062 0.84 +2.0 61,573 - Atu5062 0.84 +5.9 61,573 - Atu5062 0.84 -1.5 61,786 + +1.5 61,814 - +0.9 61,873 - Atu5063 0.13 +0.0 61,873 - Atu5063 0.13 +0.3 61,916 + Atu5063 0.17 -1.3 61,916 + Atu5063 0.17 -0.7 61,922 + Atu5063 0.18 +1.6 61,930 - Atu5063 0.19 -1.7 61,961 - Atu5063 0.23 -1.3 61,999 - Atu5063 0.27 -0.4 62,057 - Atu5063 0.33 +0.0 62,093 + Atu5063 0.38 +0.5 62,093 + Atu5063 0.38 -0.8 62,093 + Atu5063 0.38 +1.9 62,093 + Atu5063 0.38 -1.2 62,093 + Atu5063 0.38 -0.3 62,101 - Atu5063 0.38 +0.6 62,126 + Atu5063 0.41 +0.3 62,126 + Atu5063 0.41 +0.9 62,136 + Atu5063 0.42 -1.9 62,172 + Atu5063 0.47 -0.8 62,225 + Atu5063 0.53 -2.1 62,391 + Atu5063 0.71 -0.2 62,459 + Atu5063 0.79 +0.7 62,493 + Atu5063 0.83 +0.9 62,511 + Atu5063 0.85 +1.8 62,546 + Atu5063 0.89 -1.6 62,625 + +0.2 62,625 + +0.9 62,663 - +0.4 62,666 - +0.1 62,699 + -1.0 62,718 - -2.3 62,733 - -2.3
Or see this region's nucleotide sequence