Experiment: Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0821 and Atu0822 overlap by 8 nucleotides Atu0822 and Atu0823 are separated by 11 nucleotides Atu0823 and Atu0824 are separated by 319 nucleotides Atu0824 and Atu0825 are separated by 108 nucleotides
Atu0821: Atu0821 - ABC transporter, membrane spanning protein, at 819,388 to 820,245
Atu0821
Atu0822: Atu0822 - ABC transporter, membrane spanning protein, at 820,238 to 821,110
Atu0822
Atu0823: Atu0823 - ABC transporter, nucleotide binding/ATPase protein, at 821,122 to 822,162
Atu0823
Atu0824: Atu0824 - hypothetical protein, at 822,482 to 822,823
Atu0824
Atu0825: Atu0825 - quinone oxidoreductase, at 822,932 to 823,915
Atu0825
Position (kb) 821
822
823 Strain fitness (log2 ratio) -2
-1
0
1
2 at 820.221 kb on - strand at 820.297 kb on - strand at 820.436 kb on - strand, within Atu0822 at 820.550 kb on + strand, within Atu0822 at 820.553 kb on + strand, within Atu0822 at 820.627 kb on - strand, within Atu0822 at 820.650 kb on - strand, within Atu0822 at 820.650 kb on - strand, within Atu0822 at 820.654 kb on + strand, within Atu0822 at 820.750 kb on - strand, within Atu0822 at 820.766 kb on - strand, within Atu0822 at 820.830 kb on + strand, within Atu0822 at 820.835 kb on - strand, within Atu0822 at 820.861 kb on + strand, within Atu0822 at 820.861 kb on + strand, within Atu0822 at 820.871 kb on + strand, within Atu0822 at 820.879 kb on - strand, within Atu0822 at 820.928 kb on + strand, within Atu0822 at 821.011 kb on - strand, within Atu0822 at 821.175 kb on + strand at 821.220 kb on + strand at 821.340 kb on - strand, within Atu0823 at 821.340 kb on - strand, within Atu0823 at 821.414 kb on + strand, within Atu0823 at 821.414 kb on + strand, within Atu0823 at 821.479 kb on - strand, within Atu0823 at 821.512 kb on - strand, within Atu0823 at 821.514 kb on + strand, within Atu0823 at 821.616 kb on - strand, within Atu0823 at 821.649 kb on - strand, within Atu0823 at 821.680 kb on + strand, within Atu0823 at 821.710 kb on - strand, within Atu0823 at 821.808 kb on - strand, within Atu0823 at 821.870 kb on + strand, within Atu0823 at 821.875 kb on + strand, within Atu0823 at 821.878 kb on - strand, within Atu0823 at 821.878 kb on - strand, within Atu0823 at 821.888 kb on - strand, within Atu0823 at 821.923 kb on - strand, within Atu0823 at 821.991 kb on + strand, within Atu0823 at 822.053 kb on + strand, within Atu0823 at 822.087 kb on + strand at 822.100 kb on - strand at 822.110 kb on + strand at 822.164 kb on - strand at 822.202 kb on + strand at 822.236 kb on - strand at 822.251 kb on - strand at 822.287 kb on - strand at 822.311 kb on - strand at 822.351 kb on + strand at 822.417 kb on + strand at 822.579 kb on - strand, within Atu0824 at 822.794 kb on - strand at 822.938 kb on - strand at 823.059 kb on + strand, within Atu0825 at 823.059 kb on + strand, within Atu0825 at 823.067 kb on - strand, within Atu0825 at 823.110 kb on + strand, within Atu0825
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct remove 820,221 - +0.9 820,297 - -1.0 820,436 - Atu0822 0.23 +0.3 820,550 + Atu0822 0.36 +1.5 820,553 + Atu0822 0.36 +0.4 820,627 - Atu0822 0.45 +1.9 820,650 - Atu0822 0.47 +1.7 820,650 - Atu0822 0.47 +1.3 820,654 + Atu0822 0.48 -2.3 820,750 - Atu0822 0.59 +1.1 820,766 - Atu0822 0.60 +0.7 820,830 + Atu0822 0.68 +0.3 820,835 - Atu0822 0.68 +0.6 820,861 + Atu0822 0.71 -2.2 820,861 + Atu0822 0.71 +0.3 820,871 + Atu0822 0.73 +0.7 820,879 - Atu0822 0.73 +1.8 820,928 + Atu0822 0.79 -0.1 821,011 - Atu0822 0.89 -1.2 821,175 + +0.4 821,220 + -1.0 821,340 - Atu0823 0.21 -1.0 821,340 - Atu0823 0.21 -0.7 821,414 + Atu0823 0.28 +2.4 821,414 + Atu0823 0.28 +0.3 821,479 - Atu0823 0.34 -0.6 821,512 - Atu0823 0.37 +1.1 821,514 + Atu0823 0.38 +0.4 821,616 - Atu0823 0.47 +0.6 821,649 - Atu0823 0.51 -0.4 821,680 + Atu0823 0.54 -1.2 821,710 - Atu0823 0.56 +0.1 821,808 - Atu0823 0.66 +0.6 821,870 + Atu0823 0.72 -0.1 821,875 + Atu0823 0.72 +0.1 821,878 - Atu0823 0.73 +0.5 821,878 - Atu0823 0.73 +0.0 821,888 - Atu0823 0.74 -1.8 821,923 - Atu0823 0.77 +0.5 821,991 + Atu0823 0.83 +0.7 822,053 + Atu0823 0.89 +2.5 822,087 + -0.9 822,100 - +1.3 822,110 + -0.4 822,164 - +1.1 822,202 + +0.6 822,236 - -1.4 822,251 - +0.3 822,287 - -1.3 822,311 - +1.7 822,351 + +1.4 822,417 + +1.6 822,579 - Atu0824 0.28 -1.9 822,794 - -0.2 822,938 - -1.4 823,059 + Atu0825 0.13 -0.7 823,059 + Atu0825 0.13 -1.2 823,067 - Atu0825 0.14 -0.4 823,110 + Atu0825 0.18 -0.6
Or see this region's nucleotide sequence