Experiment: Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6133 and Atu6134 are separated by 29 nucleotides Atu6134 and Atu6135 are separated by 217 nucleotides Atu6135 and Atu6136 are separated by 51 nucleotides
Atu6133: Atu6133 - conserved hypothetical protein, at 152,480 to 152,809
Atu6133
Atu6134: Atu6134 - transcriptional regulator, at 152,839 to 153,543
Atu6134
Atu6135: Atu6135 - Sucrose phosphorylase-like protein, at 153,761 to 155,218
Atu6135
Atu6136: Atu6136 - Na+/phosphate symporter, at 155,270 to 156,922
Atu6136
Position (kb) 153
154
155
156 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 152.767 kb on + strand, within Atu6133 at 152.777 kb on + strand at 152.778 kb on + strand at 152.794 kb on - strand at 152.816 kb on + strand at 152.816 kb on + strand at 152.824 kb on - strand at 152.869 kb on + strand at 152.884 kb on + strand at 152.887 kb on - strand at 152.900 kb on - strand at 152.925 kb on + strand, within Atu6134 at 152.933 kb on + strand, within Atu6134 at 152.935 kb on + strand, within Atu6134 at 152.941 kb on - strand, within Atu6134 at 152.941 kb on - strand, within Atu6134 at 152.948 kb on + strand, within Atu6134 at 152.950 kb on + strand, within Atu6134 at 152.958 kb on - strand, within Atu6134 at 153.012 kb on + strand, within Atu6134 at 153.052 kb on + strand, within Atu6134 at 153.060 kb on - strand, within Atu6134 at 153.092 kb on - strand, within Atu6134 at 153.102 kb on - strand, within Atu6134 at 153.132 kb on - strand, within Atu6134 at 153.176 kb on - strand, within Atu6134 at 153.176 kb on - strand, within Atu6134 at 153.185 kb on + strand, within Atu6134 at 153.292 kb on + strand, within Atu6134 at 153.299 kb on - strand, within Atu6134 at 153.479 kb on - strand at 153.483 kb on + strand at 153.530 kb on + strand at 153.576 kb on + strand at 153.576 kb on + strand at 153.577 kb on + strand at 153.609 kb on + strand at 153.630 kb on + strand at 153.638 kb on - strand at 153.684 kb on - strand at 153.685 kb on + strand at 153.693 kb on - strand at 153.702 kb on + strand at 153.723 kb on - strand at 153.782 kb on + strand at 153.787 kb on + strand at 153.830 kb on + strand at 153.847 kb on - strand at 153.867 kb on - strand at 153.895 kb on - strand at 153.972 kb on + strand, within Atu6135 at 153.974 kb on + strand, within Atu6135 at 153.989 kb on + strand, within Atu6135 at 154.023 kb on - strand, within Atu6135 at 154.051 kb on + strand, within Atu6135 at 154.051 kb on + strand, within Atu6135 at 154.173 kb on - strand, within Atu6135 at 154.184 kb on - strand, within Atu6135 at 154.203 kb on - strand, within Atu6135 at 154.330 kb on + strand, within Atu6135 at 154.336 kb on + strand, within Atu6135 at 154.346 kb on + strand, within Atu6135 at 154.419 kb on + strand, within Atu6135 at 154.427 kb on - strand, within Atu6135 at 154.427 kb on - strand, within Atu6135 at 154.442 kb on - strand, within Atu6135 at 154.455 kb on - strand, within Atu6135 at 154.458 kb on + strand, within Atu6135 at 154.460 kb on + strand, within Atu6135 at 154.460 kb on + strand, within Atu6135 at 154.468 kb on - strand, within Atu6135 at 154.526 kb on - strand, within Atu6135 at 154.552 kb on - strand, within Atu6135 at 154.708 kb on - strand, within Atu6135 at 154.718 kb on + strand, within Atu6135 at 154.726 kb on - strand, within Atu6135 at 154.738 kb on + strand, within Atu6135 at 154.746 kb on - strand, within Atu6135 at 154.746 kb on - strand, within Atu6135 at 154.802 kb on + strand, within Atu6135 at 154.838 kb on + strand, within Atu6135 at 154.846 kb on - strand, within Atu6135 at 154.989 kb on + strand, within Atu6135 at 155.050 kb on - strand, within Atu6135 at 155.102 kb on + strand at 155.117 kb on + strand at 155.169 kb on + strand at 155.246 kb on - strand at 155.275 kb on + strand at 155.283 kb on - strand at 155.283 kb on - strand at 155.343 kb on + strand at 155.385 kb on + strand at 155.413 kb on - strand at 155.440 kb on - strand, within Atu6136 at 155.462 kb on + strand, within Atu6136 at 155.480 kb on + strand, within Atu6136 at 155.557 kb on + strand, within Atu6136 at 155.598 kb on - strand, within Atu6136 at 155.623 kb on - strand, within Atu6136 at 155.738 kb on + strand, within Atu6136 at 155.743 kb on + strand, within Atu6136 at 155.751 kb on - strand, within Atu6136 at 155.751 kb on - strand, within Atu6136 at 155.772 kb on + strand, within Atu6136 at 155.772 kb on + strand, within Atu6136 at 155.813 kb on - strand, within Atu6136 at 155.815 kb on + strand, within Atu6136 at 155.927 kb on - strand, within Atu6136 at 155.929 kb on + strand, within Atu6136 at 155.929 kb on + strand, within Atu6136 at 155.948 kb on - strand, within Atu6136 at 155.978 kb on + strand, within Atu6136 at 155.986 kb on - strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 155.989 kb on + strand, within Atu6136 at 156.000 kb on + strand, within Atu6136 at 156.008 kb on - strand, within Atu6136 at 156.012 kb on + strand, within Atu6136 at 156.012 kb on + strand, within Atu6136 at 156.018 kb on - strand, within Atu6136 at 156.018 kb on - strand, within Atu6136 at 156.020 kb on - strand, within Atu6136 at 156.030 kb on - strand, within Atu6136 at 156.030 kb on - strand, within Atu6136 at 156.055 kb on - strand, within Atu6136 at 156.055 kb on - strand, within Atu6136 at 156.158 kb on + strand, within Atu6136 at 156.158 kb on + strand, within Atu6136 at 156.198 kb on + strand, within Atu6136 at 156.202 kb on - strand, within Atu6136 at 156.206 kb on - strand, within Atu6136
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct remove 152,767 + Atu6133 0.87 -3.0 152,777 + -0.7 152,778 + +0.3 152,794 - +1.0 152,816 + -1.5 152,816 + +1.9 152,824 - -0.6 152,869 + -1.3 152,884 + -0.4 152,887 - +2.0 152,900 - +1.3 152,925 + Atu6134 0.12 +0.3 152,933 + Atu6134 0.13 +1.2 152,935 + Atu6134 0.14 -0.6 152,941 - Atu6134 0.14 +1.2 152,941 - Atu6134 0.14 -0.2 152,948 + Atu6134 0.15 -0.5 152,950 + Atu6134 0.16 +0.1 152,958 - Atu6134 0.17 +0.4 153,012 + Atu6134 0.25 +0.4 153,052 + Atu6134 0.30 -2.5 153,060 - Atu6134 0.31 +0.6 153,092 - Atu6134 0.36 -1.4 153,102 - Atu6134 0.37 -1.3 153,132 - Atu6134 0.42 +3.7 153,176 - Atu6134 0.48 -0.8 153,176 - Atu6134 0.48 +1.3 153,185 + Atu6134 0.49 -0.4 153,292 + Atu6134 0.64 -2.0 153,299 - Atu6134 0.65 +2.0 153,479 - +0.1 153,483 + -0.5 153,530 + -1.0 153,576 + -0.4 153,576 + -0.3 153,577 + -0.3 153,609 + -1.6 153,630 + -0.2 153,638 - -0.4 153,684 - +6.5 153,685 + -3.1 153,693 - -1.4 153,702 + -1.2 153,723 - -0.4 153,782 + -0.1 153,787 + -1.5 153,830 + +0.1 153,847 - +0.3 153,867 - +0.1 153,895 - -0.2 153,972 + Atu6135 0.14 -1.7 153,974 + Atu6135 0.15 +0.8 153,989 + Atu6135 0.16 -2.1 154,023 - Atu6135 0.18 -0.8 154,051 + Atu6135 0.20 +1.8 154,051 + Atu6135 0.20 -1.3 154,173 - Atu6135 0.28 +0.0 154,184 - Atu6135 0.29 -1.6 154,203 - Atu6135 0.30 +0.5 154,330 + Atu6135 0.39 -0.9 154,336 + Atu6135 0.39 -2.3 154,346 + Atu6135 0.40 -0.6 154,419 + Atu6135 0.45 +1.0 154,427 - Atu6135 0.46 -1.8 154,427 - Atu6135 0.46 -0.6 154,442 - Atu6135 0.47 +0.3 154,455 - Atu6135 0.48 -0.7 154,458 + Atu6135 0.48 -1.2 154,460 + Atu6135 0.48 +0.7 154,460 + Atu6135 0.48 +0.1 154,468 - Atu6135 0.48 +1.9 154,526 - Atu6135 0.52 -0.1 154,552 - Atu6135 0.54 -0.4 154,708 - Atu6135 0.65 +1.4 154,718 + Atu6135 0.66 -0.7 154,726 - Atu6135 0.66 +0.1 154,738 + Atu6135 0.67 +0.2 154,746 - Atu6135 0.68 -1.3 154,746 - Atu6135 0.68 -0.8 154,802 + Atu6135 0.71 +0.7 154,838 + Atu6135 0.74 +1.2 154,846 - Atu6135 0.74 -0.2 154,989 + Atu6135 0.84 -0.6 155,050 - Atu6135 0.88 +0.2 155,102 + +0.1 155,117 + -0.2 155,169 + +0.0 155,246 - +1.1 155,275 + -1.2 155,283 - -0.6 155,283 - +1.1 155,343 + +0.1 155,385 + +0.1 155,413 - +0.1 155,440 - Atu6136 0.10 +0.1 155,462 + Atu6136 0.12 +3.3 155,480 + Atu6136 0.13 -0.5 155,557 + Atu6136 0.17 -0.7 155,598 - Atu6136 0.20 +0.9 155,623 - Atu6136 0.21 +0.6 155,738 + Atu6136 0.28 -0.2 155,743 + Atu6136 0.29 -0.4 155,751 - Atu6136 0.29 -2.0 155,751 - Atu6136 0.29 -0.6 155,772 + Atu6136 0.30 +2.7 155,772 + Atu6136 0.30 +0.6 155,813 - Atu6136 0.33 +0.3 155,815 + Atu6136 0.33 -1.6 155,927 - Atu6136 0.40 -0.5 155,929 + Atu6136 0.40 +0.8 155,929 + Atu6136 0.40 +0.4 155,948 - Atu6136 0.41 -2.6 155,978 + Atu6136 0.43 +0.0 155,986 - Atu6136 0.43 -0.6 155,989 + Atu6136 0.43 +1.0 155,989 + Atu6136 0.43 -1.7 155,989 + Atu6136 0.43 -0.4 156,000 + Atu6136 0.44 -0.1 156,008 - Atu6136 0.45 +0.8 156,012 + Atu6136 0.45 -1.4 156,012 + Atu6136 0.45 +0.3 156,018 - Atu6136 0.45 +1.7 156,018 - Atu6136 0.45 +0.6 156,020 - Atu6136 0.45 -0.3 156,030 - Atu6136 0.46 +0.3 156,030 - Atu6136 0.46 -0.4 156,055 - Atu6136 0.47 +2.2 156,055 - Atu6136 0.47 +0.7 156,158 + Atu6136 0.54 +0.8 156,158 + Atu6136 0.54 +0.5 156,198 + Atu6136 0.56 +1.2 156,202 - Atu6136 0.56 -1.3 156,206 - Atu6136 0.57 +0.0
Or see this region's nucleotide sequence