Experiment: Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3673 and Atu3674 are separated by 72 nucleotides Atu3674 and Atu3675 are separated by 45 nucleotides
Atu3673: Atu3673 - siderophore biosynthesis protein, at 727,195 to 729,447
Atu3673
Atu3674: Atu3674 - hypothetical protein, at 729,520 to 729,723
Atu3674
Atu3675: Atu3675 - peptide synthetase, siderophore biosynthesis protein, at 729,769 to 734,331
Atu3675
Position (kb) 729
730 Strain fitness (log2 ratio) -1
0
1
2 at 728.552 kb on - strand, within Atu3673 at 728.552 kb on - strand, within Atu3673 at 728.553 kb on + strand, within Atu3673 at 728.553 kb on + strand, within Atu3673 at 728.561 kb on + strand, within Atu3673 at 728.561 kb on - strand, within Atu3673 at 728.563 kb on + strand, within Atu3673 at 728.571 kb on - strand, within Atu3673 at 728.573 kb on + strand, within Atu3673 at 728.588 kb on - strand, within Atu3673 at 728.595 kb on - strand, within Atu3673 at 728.595 kb on - strand, within Atu3673 at 728.688 kb on + strand, within Atu3673 at 728.725 kb on + strand, within Atu3673 at 728.738 kb on - strand, within Atu3673 at 728.763 kb on - strand, within Atu3673 at 728.785 kb on - strand, within Atu3673 at 728.838 kb on + strand, within Atu3673 at 728.931 kb on + strand, within Atu3673 at 728.939 kb on - strand, within Atu3673 at 729.179 kb on - strand, within Atu3673 at 729.289 kb on - strand at 729.319 kb on - strand at 729.321 kb on - strand at 729.380 kb on - strand at 729.581 kb on - strand, within Atu3674 at 729.647 kb on - strand, within Atu3674 at 729.694 kb on + strand, within Atu3674 at 729.771 kb on + strand at 729.882 kb on - strand at 729.939 kb on + strand at 729.970 kb on - strand at 730.036 kb on - strand at 730.047 kb on + strand at 730.054 kb on - strand at 730.141 kb on + strand at 730.171 kb on + strand at 730.171 kb on + strand at 730.179 kb on - strand at 730.179 kb on - strand at 730.179 kb on - strand at 730.211 kb on - strand at 730.366 kb on - strand, within Atu3675 at 730.373 kb on + strand, within Atu3675 at 730.383 kb on + strand, within Atu3675 at 730.397 kb on - strand, within Atu3675 at 730.456 kb on - strand, within Atu3675 at 730.456 kb on - strand, within Atu3675 at 730.590 kb on + strand, within Atu3675 at 730.633 kb on + strand, within Atu3675 at 730.633 kb on + strand, within Atu3675 at 730.641 kb on - strand, within Atu3675 at 730.703 kb on - strand, within Atu3675 at 730.703 kb on - strand, within Atu3675
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct remove 728,552 - Atu3673 0.60 -0.4 728,552 - Atu3673 0.60 +2.1 728,553 + Atu3673 0.60 +1.1 728,553 + Atu3673 0.60 +1.0 728,561 + Atu3673 0.61 -0.6 728,561 - Atu3673 0.61 +0.5 728,563 + Atu3673 0.61 -1.5 728,571 - Atu3673 0.61 +0.7 728,573 + Atu3673 0.61 +0.6 728,588 - Atu3673 0.62 +0.5 728,595 - Atu3673 0.62 +1.5 728,595 - Atu3673 0.62 -0.3 728,688 + Atu3673 0.66 +1.5 728,725 + Atu3673 0.68 +0.3 728,738 - Atu3673 0.68 +0.2 728,763 - Atu3673 0.70 +0.5 728,785 - Atu3673 0.71 +1.5 728,838 + Atu3673 0.73 -0.5 728,931 + Atu3673 0.77 -0.0 728,939 - Atu3673 0.77 +0.9 729,179 - Atu3673 0.88 -0.1 729,289 - -0.4 729,319 - -1.3 729,321 - -0.4 729,380 - +0.3 729,581 - Atu3674 0.30 +0.3 729,647 - Atu3674 0.62 +2.1 729,694 + Atu3674 0.85 +1.0 729,771 + +0.7 729,882 - +0.2 729,939 + -1.1 729,970 - +0.4 730,036 - -0.6 730,047 + +0.6 730,054 - -0.7 730,141 + +0.5 730,171 + +2.0 730,171 + -0.6 730,179 - +0.0 730,179 - +1.0 730,179 - -0.0 730,211 - +0.4 730,366 - Atu3675 0.13 +0.0 730,373 + Atu3675 0.13 +0.6 730,383 + Atu3675 0.13 +1.6 730,397 - Atu3675 0.14 +0.2 730,456 - Atu3675 0.15 +0.2 730,456 - Atu3675 0.15 +0.4 730,590 + Atu3675 0.18 -0.6 730,633 + Atu3675 0.19 +0.4 730,633 + Atu3675 0.19 +1.1 730,641 - Atu3675 0.19 +1.1 730,703 - Atu3675 0.20 +1.6 730,703 - Atu3675 0.20 +0.4
Or see this region's nucleotide sequence