Experiment: Growth with Chloride 200 mM; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_1700 and PP_1701 are separated by 3 nucleotides PP_1701 and PP_1702 are separated by 217 nucleotides PP_1702 and PP_t15 are separated by 217 nucleotides PP_t15 and PP_t16 are separated by 13 nucleotides PP_t16 and PP_t17 are separated by 170 nucleotides PP_t17 and PP_t18 are separated by 13 nucleotides
PP_1700: PP_1700 - Acyltransferase, at 1,894,767 to 1,896,752
_1700
PP_1701: PP_1701 - transporter, at 1,896,756 to 1,897,073
_1701
PP_1702: PP_1702 - Recombination-associated protein RdgC, at 1,897,291 to 1,898,211
_1702
PP_t15: PP_t15 - tRNA-Val, at 1,898,429 to 1,898,504
_t15
PP_t16: PP_t16 - tRNA-Asp, at 1,898,518 to 1,898,594
_t16
PP_t17: PP_t17 - tRNA-Val, at 1,898,765 to 1,898,840
_t17
PP_t18: PP_t18 - tRNA-Asp, at 1,898,854 to 1,898,930
_t18
Position (kb) 1897
1898
1899 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1896.303 kb on - strand, within PP_1700 at 1896.330 kb on + strand, within PP_1700 at 1896.333 kb on + strand, within PP_1700 at 1896.334 kb on - strand, within PP_1700 at 1896.334 kb on - strand, within PP_1700 at 1896.334 kb on - strand, within PP_1700 at 1896.334 kb on - strand, within PP_1700 at 1896.334 kb on - strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.342 kb on + strand, within PP_1700 at 1896.343 kb on - strand, within PP_1700 at 1896.424 kb on - strand, within PP_1700 at 1896.424 kb on - strand at 1896.424 kb on - strand, within PP_1700 at 1896.424 kb on - strand, within PP_1700 at 1896.453 kb on + strand, within PP_1700 at 1896.518 kb on - strand, within PP_1700 at 1896.602 kb on + strand at 1896.603 kb on - strand at 1896.971 kb on + strand, within PP_1701 at 1897.286 kb on - strand at 1897.643 kb on + strand at 1897.643 kb on + strand, within PP_1702 at 1897.643 kb on + strand, within PP_1702 at 1897.643 kb on + strand, within PP_1702 at 1897.644 kb on - strand at 1897.644 kb on - strand, within PP_1702 at 1897.644 kb on - strand, within PP_1702 at 1897.911 kb on + strand, within PP_1702 at 1897.912 kb on - strand, within PP_1702 at 1898.024 kb on + strand, within PP_1702 at 1898.024 kb on + strand, within PP_1702 at 1898.024 kb on + strand, within PP_1702 at 1898.025 kb on - strand, within PP_1702 at 1898.087 kb on + strand, within PP_1702 at 1898.087 kb on + strand, within PP_1702 at 1898.087 kb on + strand, within PP_1702 at 1898.186 kb on + strand at 1898.229 kb on + strand at 1898.230 kb on - strand at 1898.230 kb on - strand at 1898.236 kb on + strand at 1898.236 kb on + strand at 1898.248 kb on + strand at 1898.248 kb on + strand at 1898.301 kb on + strand at 1898.301 kb on + strand at 1898.301 kb on + strand at 1898.301 kb on + strand at 1898.301 kb on + strand at 1898.437 kb on - strand at 1898.630 kb on + strand at 1898.709 kb on - strand at 1898.739 kb on - strand at 1898.984 kb on + strand at 1899.043 kb on - strand at 1899.043 kb on - strand at 1899.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth with Chloride 200 mM; with MOPS remove 1,896,303 - PP_1700 0.77 -1.4 1,896,330 + PP_1700 0.79 -0.4 1,896,333 + PP_1700 0.79 +1.4 1,896,334 - PP_1700 0.79 +0.0 1,896,334 - PP_1700 0.79 -2.6 1,896,334 - PP_1700 0.79 +1.6 1,896,334 - PP_1700 0.79 -0.6 1,896,334 - PP_1700 0.79 +0.0 1,896,342 + PP_1700 0.79 -0.8 1,896,342 + PP_1700 0.79 -2.8 1,896,342 + PP_1700 0.79 +0.2 1,896,342 + PP_1700 0.79 -3.3 1,896,342 + PP_1700 0.79 -1.2 1,896,342 + PP_1700 0.79 +0.9 1,896,343 - PP_1700 0.79 +1.4 1,896,424 - PP_1700 0.83 -0.9 1,896,424 - +1.0 1,896,424 - PP_1700 0.83 +0.9 1,896,424 - PP_1700 0.83 +0.5 1,896,453 + PP_1700 0.85 -0.1 1,896,518 - PP_1700 0.88 -1.5 1,896,602 + +0.3 1,896,603 - +0.7 1,896,971 + PP_1701 0.68 -0.4 1,897,286 - -1.5 1,897,643 + -2.0 1,897,643 + PP_1702 0.38 +0.0 1,897,643 + PP_1702 0.38 +1.6 1,897,643 + PP_1702 0.38 -2.6 1,897,644 - -1.2 1,897,644 - PP_1702 0.38 +1.9 1,897,644 - PP_1702 0.38 +2.1 1,897,911 + PP_1702 0.67 -2.0 1,897,912 - PP_1702 0.67 +0.6 1,898,024 + PP_1702 0.80 +1.0 1,898,024 + PP_1702 0.80 +1.9 1,898,024 + PP_1702 0.80 +0.9 1,898,025 - PP_1702 0.80 +1.9 1,898,087 + PP_1702 0.86 -2.7 1,898,087 + PP_1702 0.86 -3.0 1,898,087 + PP_1702 0.86 +1.4 1,898,186 + -1.6 1,898,229 + +2.0 1,898,230 - -1.0 1,898,230 - +0.3 1,898,236 + +0.4 1,898,236 + -1.6 1,898,248 + -2.9 1,898,248 + +1.8 1,898,301 + -0.8 1,898,301 + +0.1 1,898,301 + +0.2 1,898,301 + +1.3 1,898,301 + -0.0 1,898,437 - +1.6 1,898,630 + +0.0 1,898,709 - -3.0 1,898,739 - -3.2 1,898,984 + +0.7 1,899,043 - -1.9 1,899,043 - +0.5 1,899,191 - -0.5
Or see this region's nucleotide sequence