Experiment: Growth at 34C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5166 and PP_5167 are separated by 64 nucleotides PP_5167 and PP_5168 are separated by 210 nucleotides
PP_5166: PP_5166 - Sigma-54 dependent transcriptional regulator, at 5,891,793 to 5,892,623
_5166
PP_5167: PP_5167 - conserved hypothetical protein, at 5,892,688 to 5,893,269
_5167
PP_5168: PP_5168 - sulfate/thiosulfate import ATP-binding protein, at 5,893,480 to 5,894,469
_5168
Position (kb) 5892
5893
5894 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5891.701 kb on + strand at 5891.739 kb on - strand at 5891.739 kb on - strand at 5891.747 kb on - strand at 5891.764 kb on - strand at 5891.767 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.794 kb on + strand at 5891.795 kb on - strand at 5891.795 kb on - strand at 5891.795 kb on - strand at 5891.974 kb on + strand, within PP_5166 at 5891.974 kb on + strand, within PP_5166 at 5891.974 kb on + strand, within PP_5166 at 5891.975 kb on - strand, within PP_5166 at 5891.975 kb on - strand, within PP_5166 at 5891.989 kb on + strand, within PP_5166 at 5892.068 kb on - strand, within PP_5166 at 5892.250 kb on + strand, within PP_5166 at 5892.251 kb on - strand, within PP_5166 at 5892.324 kb on - strand, within PP_5166 at 5892.349 kb on + strand, within PP_5166 at 5892.350 kb on - strand, within PP_5166 at 5892.531 kb on - strand, within PP_5166 at 5892.591 kb on + strand at 5892.592 kb on - strand at 5892.679 kb on + strand at 5892.679 kb on + strand at 5892.735 kb on - strand at 5892.741 kb on - strand at 5892.840 kb on - strand, within PP_5167 at 5892.840 kb on - strand, within PP_5167 at 5893.006 kb on + strand, within PP_5167 at 5893.007 kb on - strand, within PP_5167 at 5893.248 kb on - strand at 5893.248 kb on - strand at 5893.284 kb on + strand at 5893.284 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.308 kb on + strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.309 kb on - strand at 5893.310 kb on + strand at 5893.310 kb on + strand at 5893.311 kb on - strand at 5893.311 kb on - strand at 5893.407 kb on + strand at 5893.407 kb on + strand at 5893.408 kb on - strand at 5893.408 kb on - strand at 5893.481 kb on + strand at 5893.481 kb on + strand at 5893.481 kb on + strand at 5893.481 kb on + strand at 5893.481 kb on + strand at 5893.481 kb on + strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.482 kb on - strand at 5893.485 kb on + strand at 5893.486 kb on - strand at 5893.770 kb on - strand, within PP_5168 at 5893.796 kb on + strand, within PP_5168 at 5893.797 kb on - strand, within PP_5168 at 5894.222 kb on + strand, within PP_5168
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 34C remove 5,891,701 + -0.6 5,891,739 - +0.4 5,891,739 - +0.7 5,891,747 - -0.4 5,891,764 - +0.1 5,891,767 + +0.6 5,891,794 + +0.3 5,891,794 + +0.4 5,891,794 + +0.8 5,891,794 + +0.2 5,891,794 + +0.3 5,891,794 + -0.2 5,891,794 + +0.4 5,891,794 + -1.3 5,891,795 - -0.1 5,891,795 - -1.4 5,891,795 - +0.3 5,891,974 + PP_5166 0.22 -1.7 5,891,974 + PP_5166 0.22 -0.5 5,891,974 + PP_5166 0.22 -0.4 5,891,975 - PP_5166 0.22 +1.7 5,891,975 - PP_5166 0.22 +0.1 5,891,989 + PP_5166 0.24 -0.5 5,892,068 - PP_5166 0.33 +0.3 5,892,250 + PP_5166 0.55 +0.5 5,892,251 - PP_5166 0.55 -0.6 5,892,324 - PP_5166 0.64 +0.7 5,892,349 + PP_5166 0.67 +1.9 5,892,350 - PP_5166 0.67 +0.4 5,892,531 - PP_5166 0.89 +0.2 5,892,591 + +0.2 5,892,592 - +0.4 5,892,679 + -0.8 5,892,679 + +0.3 5,892,735 - -1.7 5,892,741 - -0.2 5,892,840 - PP_5167 0.26 -0.3 5,892,840 - PP_5167 0.26 -0.0 5,893,006 + PP_5167 0.55 +1.3 5,893,007 - PP_5167 0.55 +2.0 5,893,248 - +1.5 5,893,248 - -0.2 5,893,284 + -0.8 5,893,284 + +0.9 5,893,308 + +1.2 5,893,308 + +0.5 5,893,308 + +0.6 5,893,308 + +0.4 5,893,308 + +1.0 5,893,308 + -0.3 5,893,308 + +0.9 5,893,308 + -0.3 5,893,308 + +0.6 5,893,308 + +0.8 5,893,308 + -0.2 5,893,309 - +0.6 5,893,309 - +0.3 5,893,309 - +1.1 5,893,309 - -0.2 5,893,309 - +0.8 5,893,309 - +0.6 5,893,309 - -0.3 5,893,309 - -0.0 5,893,309 - +0.4 5,893,309 - -0.0 5,893,309 - +0.6 5,893,309 - -0.1 5,893,309 - -0.7 5,893,309 - +0.1 5,893,310 + +0.0 5,893,310 + -1.1 5,893,311 - -0.0 5,893,311 - -0.0 5,893,407 + +0.9 5,893,407 + -2.0 5,893,408 - -0.4 5,893,408 - -1.0 5,893,481 + +0.8 5,893,481 + +0.9 5,893,481 + +0.1 5,893,481 + +1.2 5,893,481 + -0.0 5,893,481 + -0.8 5,893,482 - +0.1 5,893,482 - -0.1 5,893,482 - -0.3 5,893,482 - +0.5 5,893,482 - -1.4 5,893,482 - +0.3 5,893,482 - +0.9 5,893,485 + +0.7 5,893,486 - +0.3 5,893,770 - PP_5168 0.29 -0.2 5,893,796 + PP_5168 0.32 +0.8 5,893,797 - PP_5168 0.32 -0.2 5,894,222 + PP_5168 0.75 -1.5
Or see this region's nucleotide sequence