Experiment: Growth at 34C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5161 and PP_5162 are separated by 129 nucleotides PP_5162 and PP_5163 overlap by 22 nucleotides PP_5163 and PP_5164 are separated by 86 nucleotides
PP_5161: PP_5161 - putative lysophospholipase, at 5,886,014 to 5,887,015
_5161
PP_5162: PP_5162 - conserved exported protein of unknown function, at 5,887,145 to 5,887,714
_5162
PP_5163: PP_5163 - maltose acetyltransferase, at 5,887,693 to 5,888,259
_5163
PP_5164: PP_5164 - Penicillin amidase family protein, at 5,888,346 to 5,890,712
_5164
Position (kb) 5887
5888 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5886.382 kb on - strand, within PP_5161 at 5886.585 kb on + strand, within PP_5161 at 5886.717 kb on + strand, within PP_5161 at 5886.717 kb on + strand, within PP_5161 at 5886.718 kb on - strand, within PP_5161 at 5886.840 kb on + strand, within PP_5161 at 5886.841 kb on - strand, within PP_5161 at 5886.945 kb on + strand at 5886.946 kb on - strand at 5886.966 kb on - strand at 5886.966 kb on - strand at 5886.966 kb on - strand at 5887.038 kb on - strand at 5887.038 kb on - strand at 5887.150 kb on + strand at 5887.203 kb on + strand, within PP_5162 at 5887.221 kb on - strand, within PP_5162 at 5887.242 kb on - strand, within PP_5162 at 5887.296 kb on + strand, within PP_5162 at 5887.297 kb on - strand, within PP_5162 at 5887.297 kb on - strand, within PP_5162 at 5887.297 kb on - strand, within PP_5162 at 5887.396 kb on + strand, within PP_5162 at 5887.424 kb on - strand, within PP_5162 at 5887.424 kb on - strand, within PP_5162 at 5887.571 kb on + strand, within PP_5162 at 5887.571 kb on + strand, within PP_5162 at 5887.571 kb on + strand, within PP_5162 at 5887.584 kb on - strand, within PP_5162 at 5887.675 kb on + strand at 5887.694 kb on + strand at 5887.694 kb on + strand at 5887.695 kb on - strand at 5887.798 kb on - strand, within PP_5163 at 5887.928 kb on + strand, within PP_5163 at 5887.928 kb on + strand, within PP_5163 at 5887.929 kb on - strand, within PP_5163 at 5887.929 kb on - strand, within PP_5163 at 5887.929 kb on - strand, within PP_5163 at 5887.929 kb on - strand, within PP_5163 at 5887.929 kb on - strand at 5888.017 kb on - strand, within PP_5163 at 5888.019 kb on + strand, within PP_5163 at 5888.019 kb on + strand, within PP_5163 at 5888.019 kb on + strand, within PP_5163 at 5888.020 kb on - strand, within PP_5163 at 5888.039 kb on + strand, within PP_5163 at 5888.040 kb on - strand, within PP_5163 at 5888.040 kb on - strand, within PP_5163 at 5888.045 kb on + strand, within PP_5163 at 5888.055 kb on - strand, within PP_5163 at 5888.153 kb on + strand, within PP_5163 at 5888.195 kb on - strand, within PP_5163 at 5888.195 kb on - strand, within PP_5163 at 5888.195 kb on - strand, within PP_5163 at 5888.279 kb on + strand at 5888.279 kb on + strand at 5888.280 kb on - strand at 5888.280 kb on - strand at 5888.378 kb on - strand at 5888.413 kb on - strand at 5888.553 kb on + strand at 5888.593 kb on + strand, within PP_5164 at 5888.594 kb on - strand, within PP_5164 at 5888.594 kb on - strand, within PP_5164
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 34C remove 5,886,382 - PP_5161 0.37 +0.0 5,886,585 + PP_5161 0.57 +0.7 5,886,717 + PP_5161 0.70 +0.9 5,886,717 + PP_5161 0.70 +0.5 5,886,718 - PP_5161 0.70 +1.1 5,886,840 + PP_5161 0.82 +0.5 5,886,841 - PP_5161 0.83 +0.7 5,886,945 + +0.3 5,886,946 - -0.0 5,886,966 - -0.8 5,886,966 - -0.2 5,886,966 - +2.1 5,887,038 - -0.3 5,887,038 - -0.1 5,887,150 + +1.9 5,887,203 + PP_5162 0.10 +0.8 5,887,221 - PP_5162 0.13 -1.1 5,887,242 - PP_5162 0.17 -2.3 5,887,296 + PP_5162 0.26 +1.0 5,887,297 - PP_5162 0.27 +0.7 5,887,297 - PP_5162 0.27 -2.7 5,887,297 - PP_5162 0.27 +1.7 5,887,396 + PP_5162 0.44 +1.3 5,887,424 - PP_5162 0.49 +0.9 5,887,424 - PP_5162 0.49 +0.5 5,887,571 + PP_5162 0.75 +1.3 5,887,571 + PP_5162 0.75 -1.9 5,887,571 + PP_5162 0.75 +0.5 5,887,584 - PP_5162 0.77 +0.2 5,887,675 + -3.8 5,887,694 + +0.7 5,887,694 + +0.3 5,887,695 - +0.3 5,887,798 - PP_5163 0.19 -0.3 5,887,928 + PP_5163 0.41 +0.8 5,887,928 + PP_5163 0.41 +0.3 5,887,929 - PP_5163 0.42 +0.5 5,887,929 - PP_5163 0.42 -0.5 5,887,929 - PP_5163 0.42 -0.2 5,887,929 - PP_5163 0.42 +0.2 5,887,929 - -1.9 5,888,017 - PP_5163 0.57 -0.5 5,888,019 + PP_5163 0.57 +0.0 5,888,019 + PP_5163 0.57 -0.4 5,888,019 + PP_5163 0.57 -1.0 5,888,020 - PP_5163 0.58 +1.3 5,888,039 + PP_5163 0.61 +0.5 5,888,040 - PP_5163 0.61 -0.2 5,888,040 - PP_5163 0.61 +0.0 5,888,045 + PP_5163 0.62 +0.7 5,888,055 - PP_5163 0.64 +0.2 5,888,153 + PP_5163 0.81 +1.3 5,888,195 - PP_5163 0.89 -1.1 5,888,195 - PP_5163 0.89 -0.2 5,888,195 - PP_5163 0.89 -0.2 5,888,279 + +0.2 5,888,279 + -1.7 5,888,280 - -0.4 5,888,280 - -2.6 5,888,378 - +1.3 5,888,413 - +1.4 5,888,553 + +0.9 5,888,593 + PP_5164 0.10 +0.0 5,888,594 - PP_5164 0.10 +0.9 5,888,594 - PP_5164 0.10 -0.7
Or see this region's nucleotide sequence