Experiment: Growth at 34C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_5157 and PP_5158 are separated by 119 nucleotides PP_5158 and PP_5159 overlap by 14 nucleotides PP_5159 and PP_5160 are separated by 122 nucleotides PP_5160 and PP_5161 are separated by 0 nucleotides
PP_5157: PP_5157 - conserved exported protein of unknown function, at 5,883,417 to 5,883,905
_5157
PP_5158: PP_5158 - conserved protein of unknown function, at 5,884,025 to 5,884,528
_5158
PP_5159: PP_5159 - conserved protein of unknown function, at 5,884,515 to 5,885,138
_5159
PP_5160: PP_5160 - conserved exported protein of unknown function, at 5,885,261 to 5,886,013
_5160
PP_5161: PP_5161 - putative lysophospholipase, at 5,886,014 to 5,887,015
_5161
Position (kb) 5884
5885
5886 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5883.521 kb on - strand, within PP_5157 at 5883.540 kb on + strand, within PP_5157 at 5883.678 kb on + strand, within PP_5157 at 5883.678 kb on + strand, within PP_5157 at 5883.679 kb on - strand, within PP_5157 at 5883.736 kb on + strand, within PP_5157 at 5883.736 kb on + strand, within PP_5157 at 5883.737 kb on - strand, within PP_5157 at 5883.737 kb on - strand, within PP_5157 at 5883.737 kb on - strand, within PP_5157 at 5883.737 kb on - strand, within PP_5157 at 5883.737 kb on - strand, within PP_5157 at 5883.903 kb on + strand at 5883.904 kb on - strand at 5883.955 kb on - strand at 5883.965 kb on - strand at 5884.034 kb on + strand at 5884.034 kb on + strand at 5884.034 kb on + strand at 5884.034 kb on + strand at 5884.034 kb on + strand at 5884.035 kb on - strand at 5884.035 kb on - strand at 5884.035 kb on - strand at 5884.035 kb on - strand at 5884.035 kb on - strand at 5884.036 kb on + strand at 5884.036 kb on + strand at 5884.036 kb on + strand at 5884.037 kb on - strand at 5884.037 kb on - strand at 5884.037 kb on - strand at 5884.037 kb on - strand at 5884.040 kb on - strand at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.161 kb on + strand, within PP_5158 at 5884.162 kb on - strand, within PP_5158 at 5884.162 kb on - strand, within PP_5158 at 5884.162 kb on - strand, within PP_5158 at 5884.162 kb on - strand, within PP_5158 at 5884.208 kb on + strand, within PP_5158 at 5884.382 kb on + strand, within PP_5158 at 5884.382 kb on + strand, within PP_5158 at 5884.383 kb on - strand, within PP_5158 at 5884.383 kb on - strand, within PP_5158 at 5884.465 kb on - strand, within PP_5158 at 5884.585 kb on - strand, within PP_5159 at 5884.614 kb on + strand, within PP_5159 at 5884.614 kb on + strand, within PP_5159 at 5884.615 kb on - strand, within PP_5159 at 5884.717 kb on + strand, within PP_5159 at 5884.717 kb on + strand, within PP_5159 at 5884.778 kb on - strand, within PP_5159 at 5884.795 kb on + strand, within PP_5159 at 5884.796 kb on - strand, within PP_5159 at 5884.962 kb on - strand, within PP_5159 at 5885.131 kb on - strand at 5885.131 kb on - strand at 5885.131 kb on - strand at 5885.150 kb on + strand at 5885.150 kb on + strand at 5885.150 kb on + strand at 5885.150 kb on + strand at 5885.150 kb on + strand at 5885.151 kb on - strand at 5885.203 kb on - strand at 5885.203 kb on - strand at 5885.235 kb on + strand at 5885.235 kb on + strand at 5885.235 kb on + strand at 5885.336 kb on + strand at 5885.336 kb on + strand at 5885.336 kb on + strand at 5885.336 kb on + strand at 5885.336 kb on + strand at 5885.336 kb on + strand at 5885.337 kb on - strand, within PP_5160 at 5885.337 kb on - strand, within PP_5160 at 5885.337 kb on - strand, within PP_5160 at 5885.337 kb on - strand, within PP_5160 at 5885.337 kb on - strand, within PP_5160 at 5885.338 kb on + strand, within PP_5160 at 5885.338 kb on + strand, within PP_5160 at 5885.339 kb on - strand, within PP_5160 at 5885.339 kb on - strand, within PP_5160 at 5885.405 kb on + strand, within PP_5160 at 5885.433 kb on - strand at 5885.867 kb on + strand, within PP_5160 at 5885.867 kb on + strand, within PP_5160 at 5885.867 kb on + strand, within PP_5160 at 5885.867 kb on + strand, within PP_5160 at 5885.867 kb on + strand, within PP_5160 at 5885.868 kb on - strand, within PP_5160 at 5885.868 kb on - strand, within PP_5160 at 5885.873 kb on + strand, within PP_5160 at 5885.942 kb on + strand at 5885.942 kb on + strand at 5885.942 kb on + strand at 5885.943 kb on - strand at 5885.967 kb on + strand at 5885.967 kb on + strand at 5885.967 kb on + strand at 5886.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 34C remove 5,883,521 - PP_5157 0.21 -0.7 5,883,540 + PP_5157 0.25 +0.9 5,883,678 + PP_5157 0.53 -1.2 5,883,678 + PP_5157 0.53 +1.8 5,883,679 - PP_5157 0.54 -0.3 5,883,736 + PP_5157 0.65 -0.1 5,883,736 + PP_5157 0.65 +1.2 5,883,737 - PP_5157 0.65 +0.3 5,883,737 - PP_5157 0.65 +1.7 5,883,737 - PP_5157 0.65 -1.1 5,883,737 - PP_5157 0.65 -0.7 5,883,737 - PP_5157 0.65 +0.2 5,883,903 + -0.2 5,883,904 - +1.1 5,883,955 - -0.4 5,883,965 - +2.0 5,884,034 + -0.4 5,884,034 + +0.6 5,884,034 + -0.3 5,884,034 + -2.9 5,884,034 + -0.4 5,884,035 - -0.4 5,884,035 - +0.6 5,884,035 - -0.1 5,884,035 - -0.4 5,884,035 - +1.5 5,884,036 + +0.4 5,884,036 + +0.5 5,884,036 + +0.5 5,884,037 - -0.5 5,884,037 - +0.3 5,884,037 - +0.4 5,884,037 - +0.1 5,884,040 - +0.3 5,884,161 + PP_5158 0.27 -1.1 5,884,161 + PP_5158 0.27 -0.1 5,884,161 + PP_5158 0.27 -0.1 5,884,161 + PP_5158 0.27 +0.9 5,884,161 + PP_5158 0.27 -0.3 5,884,161 + PP_5158 0.27 -0.1 5,884,161 + PP_5158 0.27 +0.9 5,884,162 - PP_5158 0.27 +1.4 5,884,162 - PP_5158 0.27 +0.2 5,884,162 - PP_5158 0.27 +1.2 5,884,162 - PP_5158 0.27 +0.2 5,884,208 + PP_5158 0.36 +0.8 5,884,382 + PP_5158 0.71 +0.5 5,884,382 + PP_5158 0.71 +1.0 5,884,383 - PP_5158 0.71 -1.7 5,884,383 - PP_5158 0.71 +0.3 5,884,465 - PP_5158 0.87 -0.7 5,884,585 - PP_5159 0.11 +1.5 5,884,614 + PP_5159 0.16 +0.5 5,884,614 + PP_5159 0.16 +0.5 5,884,615 - PP_5159 0.16 +0.3 5,884,717 + PP_5159 0.32 +0.6 5,884,717 + PP_5159 0.32 +0.1 5,884,778 - PP_5159 0.42 +0.4 5,884,795 + PP_5159 0.45 +0.9 5,884,796 - PP_5159 0.45 -1.3 5,884,962 - PP_5159 0.72 +1.3 5,885,131 - +0.7 5,885,131 - +0.5 5,885,131 - -1.6 5,885,150 + +0.5 5,885,150 + -1.3 5,885,150 + -0.5 5,885,150 + +1.4 5,885,150 + -0.2 5,885,151 - +0.3 5,885,203 - -1.5 5,885,203 - -1.6 5,885,235 + -0.0 5,885,235 + +0.5 5,885,235 + +0.7 5,885,336 + +1.2 5,885,336 + +0.6 5,885,336 + -1.9 5,885,336 + -1.1 5,885,336 + +0.3 5,885,336 + +0.4 5,885,337 - PP_5160 0.10 +0.0 5,885,337 - PP_5160 0.10 -0.2 5,885,337 - PP_5160 0.10 -0.7 5,885,337 - PP_5160 0.10 -2.1 5,885,337 - PP_5160 0.10 -0.6 5,885,338 + PP_5160 0.10 -0.9 5,885,338 + PP_5160 0.10 -1.3 5,885,339 - PP_5160 0.10 -1.7 5,885,339 - PP_5160 0.10 -0.8 5,885,405 + PP_5160 0.19 -2.8 5,885,433 - +0.1 5,885,867 + PP_5160 0.80 -0.1 5,885,867 + PP_5160 0.80 -1.2 5,885,867 + PP_5160 0.80 +0.8 5,885,867 + PP_5160 0.80 -1.4 5,885,867 + PP_5160 0.80 +0.4 5,885,868 - PP_5160 0.81 -0.3 5,885,868 - PP_5160 0.81 +1.0 5,885,873 + PP_5160 0.81 -0.3 5,885,942 + +0.5 5,885,942 + -1.0 5,885,942 + +0.3 5,885,943 - -0.4 5,885,967 + -0.3 5,885,967 + -0.2 5,885,967 + +0.2 5,886,046 - +0.3
Or see this region's nucleotide sequence