Experiment: Growth at 34C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4213 and PP_4214 are separated by 14 nucleotides PP_4214 and PP_4215 are separated by 34 nucleotides PP_4215 and PP_4216 are separated by 34 nucleotides
PP_4213: PP_4213 - putative dipeptidase, at 4,759,939 to 4,761,327
_4213
PP_4214: PP_4214 - pyoverdine biosynthesis related protein, at 4,761,342 to 4,762,628
_4214
PP_4215: PP_4215 - pyoverdine biosynthesis related protein, at 4,762,663 to 4,763,568
_4215
PP_4216: PP_4216 - pyoverdine ABC export system, fused ATPase and permease components, at 4,763,603 to 4,765,261
_4216
Position (kb) 4761
4762
4763 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4760.416 kb on + strand, within PP_4213 at 4760.488 kb on + strand, within PP_4213 at 4760.488 kb on + strand, within PP_4213 at 4760.488 kb on + strand, within PP_4213 at 4760.875 kb on + strand, within PP_4213 at 4761.104 kb on + strand, within PP_4213 at 4761.104 kb on + strand, within PP_4213 at 4761.240 kb on + strand at 4761.732 kb on + strand, within PP_4214 at 4761.789 kb on + strand, within PP_4214 at 4761.789 kb on + strand, within PP_4214 at 4761.813 kb on + strand, within PP_4214 at 4761.850 kb on + strand, within PP_4214 at 4761.851 kb on - strand, within PP_4214 at 4761.892 kb on + strand, within PP_4214 at 4761.895 kb on + strand, within PP_4214 at 4762.263 kb on + strand, within PP_4214 at 4762.365 kb on + strand, within PP_4214 at 4762.480 kb on + strand, within PP_4214 at 4762.481 kb on - strand at 4762.657 kb on + strand at 4762.945 kb on + strand, within PP_4215 at 4762.975 kb on + strand, within PP_4215 at 4762.975 kb on + strand, within PP_4215 at 4762.975 kb on + strand, within PP_4215 at 4762.975 kb on + strand, within PP_4215 at 4762.975 kb on + strand, within PP_4215 at 4762.976 kb on - strand at 4763.053 kb on + strand, within PP_4215 at 4763.053 kb on + strand, within PP_4215 at 4763.053 kb on + strand, within PP_4215 at 4763.053 kb on + strand, within PP_4215 at 4763.110 kb on + strand, within PP_4215 at 4763.110 kb on + strand, within PP_4215 at 4763.338 kb on + strand, within PP_4215 at 4763.338 kb on + strand, within PP_4215 at 4763.339 kb on - strand, within PP_4215 at 4763.359 kb on + strand, within PP_4215 at 4763.359 kb on + strand, within PP_4215 at 4763.359 kb on + strand, within PP_4215
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 34C remove 4,760,416 + PP_4213 0.34 -1.3 4,760,488 + PP_4213 0.40 -0.9 4,760,488 + PP_4213 0.40 +0.2 4,760,488 + PP_4213 0.40 -0.8 4,760,875 + PP_4213 0.67 -0.1 4,761,104 + PP_4213 0.84 +0.1 4,761,104 + PP_4213 0.84 +0.5 4,761,240 + +0.3 4,761,732 + PP_4214 0.30 -0.4 4,761,789 + PP_4214 0.35 +1.1 4,761,789 + PP_4214 0.35 +1.6 4,761,813 + PP_4214 0.37 +1.5 4,761,850 + PP_4214 0.39 +0.7 4,761,851 - PP_4214 0.40 +0.8 4,761,892 + PP_4214 0.43 -3.3 4,761,895 + PP_4214 0.43 +1.0 4,762,263 + PP_4214 0.72 -0.9 4,762,365 + PP_4214 0.79 +0.4 4,762,480 + PP_4214 0.88 +1.3 4,762,481 - +1.3 4,762,657 + -0.2 4,762,945 + PP_4215 0.31 +0.5 4,762,975 + PP_4215 0.34 +3.0 4,762,975 + PP_4215 0.34 -3.1 4,762,975 + PP_4215 0.34 -0.7 4,762,975 + PP_4215 0.34 -2.2 4,762,975 + PP_4215 0.34 +1.1 4,762,976 - +2.3 4,763,053 + PP_4215 0.43 -0.1 4,763,053 + PP_4215 0.43 +0.5 4,763,053 + PP_4215 0.43 -1.1 4,763,053 + PP_4215 0.43 +2.0 4,763,110 + PP_4215 0.49 +1.2 4,763,110 + PP_4215 0.49 -2.1 4,763,338 + PP_4215 0.75 +1.6 4,763,338 + PP_4215 0.75 -0.6 4,763,339 - PP_4215 0.75 +2.4 4,763,359 + PP_4215 0.77 -1.2 4,763,359 + PP_4215 0.77 +1.3 4,763,359 + PP_4215 0.77 +0.2
Or see this region's nucleotide sequence