Experiment: Growth at 25C; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_3681 and PP_3682 are separated by 50 nucleotides PP_3682 and PP_3683 are separated by 569 nucleotides
PP_3681: PP_3681 - putative Helicase, at 4,184,223 to 4,185,881
_3681
PP_3682: PP_3682 - conserved protein of unknown function, at 4,185,932 to 4,186,084
_3682
PP_3683: PP_3683 - conserved protein of unknown function, at 4,186,654 to 4,187,895
_3683
Position (kb) 4185
4186
4187 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4185.115 kb on + strand, within PP_3681 at 4185.115 kb on + strand, within PP_3681 at 4185.115 kb on + strand, within PP_3681 at 4185.116 kb on - strand, within PP_3681 at 4185.116 kb on - strand, within PP_3681 at 4185.116 kb on - strand, within PP_3681 at 4185.116 kb on - strand, within PP_3681 at 4185.141 kb on + strand, within PP_3681 at 4185.142 kb on - strand, within PP_3681 at 4185.249 kb on + strand, within PP_3681 at 4185.250 kb on - strand, within PP_3681 at 4185.318 kb on + strand at 4185.366 kb on + strand, within PP_3681 at 4185.367 kb on - strand, within PP_3681 at 4185.418 kb on - strand, within PP_3681 at 4185.460 kb on + strand, within PP_3681 at 4185.460 kb on + strand, within PP_3681 at 4185.460 kb on + strand, within PP_3681 at 4185.460 kb on + strand, within PP_3681 at 4185.460 kb on + strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.461 kb on - strand, within PP_3681 at 4185.465 kb on + strand, within PP_3681 at 4185.495 kb on + strand, within PP_3681 at 4185.495 kb on + strand, within PP_3681 at 4185.496 kb on - strand, within PP_3681 at 4185.508 kb on + strand, within PP_3681 at 4185.508 kb on + strand, within PP_3681 at 4185.509 kb on - strand, within PP_3681 at 4185.509 kb on - strand, within PP_3681 at 4185.509 kb on - strand, within PP_3681 at 4185.727 kb on - strand at 4185.780 kb on + strand at 4185.780 kb on + strand at 4185.781 kb on - strand at 4185.795 kb on - strand at 4185.795 kb on - strand at 4185.795 kb on - strand at 4185.795 kb on - strand at 4185.877 kb on + strand at 4185.877 kb on + strand at 4185.877 kb on + strand at 4185.878 kb on - strand at 4185.879 kb on + strand at 4185.879 kb on + strand at 4185.879 kb on + strand at 4185.880 kb on - strand at 4185.880 kb on - strand at 4185.880 kb on - strand at 4185.880 kb on - strand at 4185.880 kb on - strand at 4185.880 kb on - strand at 4185.917 kb on + strand at 4185.917 kb on + strand at 4185.918 kb on - strand at 4185.918 kb on - strand at 4185.918 kb on - strand at 4185.924 kb on + strand at 4185.924 kb on + strand at 4185.924 kb on + strand at 4185.924 kb on + strand at 4185.924 kb on + strand at 4185.924 kb on + strand at 4185.925 kb on - strand at 4185.925 kb on - strand at 4185.962 kb on + strand, within PP_3682 at 4186.055 kb on + strand, within PP_3682 at 4186.055 kb on + strand, within PP_3682 at 4186.056 kb on - strand, within PP_3682 at 4186.064 kb on + strand, within PP_3682 at 4186.064 kb on + strand, within PP_3682 at 4186.064 kb on + strand at 4186.065 kb on - strand, within PP_3682 at 4186.091 kb on + strand at 4186.091 kb on + strand at 4186.092 kb on - strand at 4186.092 kb on - strand at 4186.138 kb on + strand at 4186.139 kb on - strand at 4186.139 kb on - strand at 4186.139 kb on - strand at 4186.142 kb on + strand at 4186.142 kb on + strand at 4186.143 kb on - strand at 4186.143 kb on - strand at 4186.181 kb on + strand at 4186.181 kb on + strand at 4186.181 kb on + strand at 4186.182 kb on - strand at 4186.182 kb on - strand at 4186.228 kb on + strand at 4186.228 kb on + strand at 4186.229 kb on - strand at 4186.283 kb on + strand at 4186.284 kb on - strand at 4186.284 kb on - strand at 4186.327 kb on - strand at 4186.387 kb on + strand at 4186.388 kb on - strand at 4186.417 kb on + strand at 4186.417 kb on + strand at 4186.426 kb on + strand at 4186.426 kb on + strand at 4186.426 kb on + strand at 4186.426 kb on + strand at 4186.494 kb on + strand at 4186.494 kb on + strand at 4186.494 kb on + strand at 4186.494 kb on + strand at 4186.494 kb on + strand at 4186.494 kb on + strand at 4186.495 kb on - strand at 4186.495 kb on - strand at 4186.495 kb on - strand at 4186.501 kb on - strand at 4186.516 kb on + strand at 4186.517 kb on - strand at 4186.517 kb on - strand at 4186.517 kb on - strand at 4186.526 kb on + strand at 4186.526 kb on + strand at 4186.526 kb on + strand at 4186.527 kb on - strand at 4186.527 kb on - strand at 4186.527 kb on - strand at 4186.527 kb on - strand at 4186.597 kb on + strand at 4186.610 kb on + strand at 4186.759 kb on + strand at 4186.774 kb on + strand at 4186.774 kb on + strand at 4186.774 kb on + strand at 4186.778 kb on + strand at 4186.778 kb on + strand at 4186.779 kb on - strand, within PP_3683 at 4186.779 kb on - strand, within PP_3683 at 4186.779 kb on - strand, within PP_3683 at 4186.836 kb on + strand, within PP_3683 at 4186.837 kb on - strand, within PP_3683 at 4186.837 kb on - strand, within PP_3683 at 4186.837 kb on - strand, within PP_3683 at 4186.931 kb on + strand, within PP_3683 at 4186.931 kb on + strand, within PP_3683 at 4186.932 kb on - strand, within PP_3683 at 4186.932 kb on - strand, within PP_3683 at 4186.932 kb on - strand, within PP_3683 at 4186.932 kb on - strand, within PP_3683 at 4186.932 kb on - strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.989 kb on + strand, within PP_3683 at 4186.990 kb on - strand, within PP_3683 at 4186.990 kb on - strand, within PP_3683 at 4186.990 kb on - strand at 4187.073 kb on + strand, within PP_3683 at 4187.073 kb on + strand, within PP_3683 at 4187.074 kb on - strand, within PP_3683
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 25C; with MOPS remove 4,185,115 + PP_3681 0.54 +1.4 4,185,115 + PP_3681 0.54 +0.9 4,185,115 + PP_3681 0.54 -0.0 4,185,116 - PP_3681 0.54 +0.1 4,185,116 - PP_3681 0.54 -0.6 4,185,116 - PP_3681 0.54 -2.0 4,185,116 - PP_3681 0.54 +1.1 4,185,141 + PP_3681 0.55 -0.5 4,185,142 - PP_3681 0.55 -0.3 4,185,249 + PP_3681 0.62 -0.3 4,185,250 - PP_3681 0.62 +1.1 4,185,318 + +0.8 4,185,366 + PP_3681 0.69 -1.0 4,185,367 - PP_3681 0.69 +0.4 4,185,418 - PP_3681 0.72 +0.8 4,185,460 + PP_3681 0.75 +0.6 4,185,460 + PP_3681 0.75 -0.6 4,185,460 + PP_3681 0.75 -0.6 4,185,460 + PP_3681 0.75 +1.1 4,185,460 + PP_3681 0.75 +0.3 4,185,461 - PP_3681 0.75 -3.8 4,185,461 - PP_3681 0.75 +0.9 4,185,461 - PP_3681 0.75 +1.5 4,185,461 - PP_3681 0.75 -0.1 4,185,461 - PP_3681 0.75 +1.7 4,185,461 - PP_3681 0.75 +1.7 4,185,465 + PP_3681 0.75 -1.7 4,185,495 + PP_3681 0.77 +0.2 4,185,495 + PP_3681 0.77 -4.2 4,185,496 - PP_3681 0.77 +0.7 4,185,508 + PP_3681 0.77 +0.6 4,185,508 + PP_3681 0.77 +0.8 4,185,509 - PP_3681 0.78 +0.4 4,185,509 - PP_3681 0.78 +0.2 4,185,509 - PP_3681 0.78 -2.5 4,185,727 - +0.0 4,185,780 + -1.3 4,185,780 + +0.5 4,185,781 - -2.1 4,185,795 - -0.5 4,185,795 - +1.2 4,185,795 - -0.3 4,185,795 - +0.3 4,185,877 + +0.2 4,185,877 + -0.1 4,185,877 + -0.2 4,185,878 - +1.9 4,185,879 + +0.8 4,185,879 + -0.2 4,185,879 + +0.4 4,185,880 - -1.2 4,185,880 - +0.0 4,185,880 - +0.5 4,185,880 - +0.3 4,185,880 - +0.5 4,185,880 - -1.1 4,185,917 + +0.3 4,185,917 + -1.5 4,185,918 - -1.5 4,185,918 - +1.0 4,185,918 - +1.3 4,185,924 + -0.9 4,185,924 + -1.0 4,185,924 + -0.7 4,185,924 + +1.0 4,185,924 + +1.2 4,185,924 + -0.7 4,185,925 - +0.1 4,185,925 - -1.0 4,185,962 + PP_3682 0.20 +0.1 4,186,055 + PP_3682 0.80 +2.4 4,186,055 + PP_3682 0.80 +0.6 4,186,056 - PP_3682 0.81 +0.3 4,186,064 + PP_3682 0.86 +0.7 4,186,064 + PP_3682 0.86 +0.1 4,186,064 + +2.4 4,186,065 - PP_3682 0.87 -1.1 4,186,091 + +0.5 4,186,091 + +0.2 4,186,092 - -0.1 4,186,092 - +0.1 4,186,138 + +1.8 4,186,139 - -0.5 4,186,139 - +1.0 4,186,139 - -0.3 4,186,142 + +0.0 4,186,142 + -1.4 4,186,143 - +0.1 4,186,143 - +1.2 4,186,181 + -0.3 4,186,181 + -0.0 4,186,181 + +0.4 4,186,182 - +0.0 4,186,182 - +0.5 4,186,228 + -0.3 4,186,228 + -0.1 4,186,229 - +1.1 4,186,283 + +0.0 4,186,284 - +0.4 4,186,284 - +0.1 4,186,327 - -0.6 4,186,387 + -0.2 4,186,388 - +0.8 4,186,417 + -0.8 4,186,417 + -0.9 4,186,426 + -0.2 4,186,426 + +0.3 4,186,426 + +0.3 4,186,426 + +2.0 4,186,494 + +0.6 4,186,494 + +0.0 4,186,494 + +0.2 4,186,494 + -0.7 4,186,494 + +1.2 4,186,494 + +1.3 4,186,495 - +0.0 4,186,495 - -0.1 4,186,495 - +0.4 4,186,501 - -1.9 4,186,516 + -0.1 4,186,517 - +2.1 4,186,517 - +0.5 4,186,517 - -3.0 4,186,526 + -0.4 4,186,526 + +0.7 4,186,526 + +0.1 4,186,527 - -0.4 4,186,527 - +1.5 4,186,527 - +0.9 4,186,527 - +0.3 4,186,597 + -2.0 4,186,610 + +0.0 4,186,759 + -0.4 4,186,774 + -1.8 4,186,774 + +0.1 4,186,774 + +0.2 4,186,778 + -0.1 4,186,778 + -0.2 4,186,779 - PP_3683 0.10 -1.0 4,186,779 - PP_3683 0.10 +0.1 4,186,779 - PP_3683 0.10 +0.8 4,186,836 + PP_3683 0.15 -0.7 4,186,837 - PP_3683 0.15 -0.5 4,186,837 - PP_3683 0.15 +0.7 4,186,837 - PP_3683 0.15 -0.7 4,186,931 + PP_3683 0.22 +1.0 4,186,931 + PP_3683 0.22 -1.9 4,186,932 - PP_3683 0.22 +0.4 4,186,932 - PP_3683 0.22 -1.2 4,186,932 - PP_3683 0.22 +1.2 4,186,932 - PP_3683 0.22 -0.8 4,186,932 - PP_3683 0.22 +0.4 4,186,989 + PP_3683 0.27 +1.1 4,186,989 + PP_3683 0.27 +0.3 4,186,989 + PP_3683 0.27 +0.1 4,186,989 + PP_3683 0.27 +1.2 4,186,989 + PP_3683 0.27 +0.9 4,186,989 + PP_3683 0.27 +1.3 4,186,990 - PP_3683 0.27 +0.7 4,186,990 - PP_3683 0.27 +0.3 4,186,990 - +1.0 4,187,073 + PP_3683 0.34 +0.1 4,187,073 + PP_3683 0.34 -0.7 4,187,074 - PP_3683 0.34 +0.2
Or see this region's nucleotide sequence