Experiment: Growth at 25C; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_4819 and PP_4820 are separated by 207 nucleotides PP_4820 and PP_4821 overlap by 4 nucleotides PP_4821 and PP_4822 are separated by 81 nucleotides
PP_4819: PP_4819 - conserved protein of unknown function, at 5,480,512 to 5,481,867
_4819
PP_4820: PP_4820 - tRNA-dihydrouridine synthase B, at 5,482,075 to 5,483,088
_4820
PP_4821: PP_4821 - putative Fis-like DNA-binding protein, at 5,483,085 to 5,483,405
_4821
PP_4822: PP_4822 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 5,483,487 to 5,485,094
_4822
Position (kb) 5482
5483
5484 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5481.257 kb on + strand, within PP_4819 at 5481.363 kb on - strand, within PP_4819 at 5481.452 kb on - strand, within PP_4819 at 5481.494 kb on - strand, within PP_4819 at 5481.556 kb on - strand, within PP_4819 at 5481.587 kb on + strand, within PP_4819 at 5481.637 kb on + strand, within PP_4819 at 5481.637 kb on + strand, within PP_4819 at 5481.739 kb on + strand at 5481.739 kb on + strand at 5481.739 kb on + strand at 5481.865 kb on + strand at 5481.959 kb on + strand at 5481.959 kb on + strand at 5481.960 kb on - strand at 5481.960 kb on - strand at 5482.074 kb on + strand at 5482.074 kb on + strand at 5482.074 kb on + strand at 5482.106 kb on + strand at 5482.106 kb on + strand at 5482.106 kb on + strand at 5482.106 kb on + strand at 5482.106 kb on + strand at 5482.110 kb on + strand at 5482.110 kb on + strand at 5482.110 kb on + strand at 5482.110 kb on + strand at 5482.188 kb on + strand, within PP_4820 at 5482.368 kb on + strand, within PP_4820 at 5482.424 kb on + strand, within PP_4820 at 5482.630 kb on + strand, within PP_4820 at 5482.801 kb on + strand at 5482.891 kb on + strand, within PP_4820 at 5482.891 kb on + strand, within PP_4820 at 5482.891 kb on + strand, within PP_4820 at 5482.891 kb on + strand, within PP_4820 at 5482.891 kb on + strand, within PP_4820 at 5482.910 kb on + strand, within PP_4820 at 5482.910 kb on + strand, within PP_4820
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 25C; with MOPS remove 5,481,257 + PP_4819 0.55 +1.0 5,481,363 - PP_4819 0.63 +0.6 5,481,452 - PP_4819 0.69 +1.4 5,481,494 - PP_4819 0.72 +0.2 5,481,556 - PP_4819 0.77 -0.2 5,481,587 + PP_4819 0.79 -4.5 5,481,637 + PP_4819 0.83 +2.1 5,481,637 + PP_4819 0.83 -0.5 5,481,739 + +1.4 5,481,739 + -1.9 5,481,739 + +0.7 5,481,865 + +1.2 5,481,959 + -0.9 5,481,959 + +0.3 5,481,960 - -1.7 5,481,960 - -3.7 5,482,074 + -0.0 5,482,074 + +0.3 5,482,074 + +0.2 5,482,106 + -0.0 5,482,106 + +0.7 5,482,106 + +0.4 5,482,106 + -1.0 5,482,106 + -3.0 5,482,110 + -1.1 5,482,110 + -1.0 5,482,110 + -0.4 5,482,110 + +0.7 5,482,188 + PP_4820 0.11 +2.0 5,482,368 + PP_4820 0.29 +2.3 5,482,424 + PP_4820 0.34 -1.8 5,482,630 + PP_4820 0.55 -0.0 5,482,801 + +1.9 5,482,891 + PP_4820 0.80 +0.8 5,482,891 + PP_4820 0.80 +1.5 5,482,891 + PP_4820 0.80 -0.8 5,482,891 + PP_4820 0.80 +1.4 5,482,891 + PP_4820 0.80 +1.8 5,482,910 + PP_4820 0.82 -0.2 5,482,910 + PP_4820 0.82 +0.1
Or see this region's nucleotide sequence