Experiment: Growth at 25C; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_2995 and PP_2996 are separated by 62 nucleotides PP_2996 and PP_2997 are separated by 228 nucleotides PP_2997 and PP_2998 are separated by 93 nucleotides
PP_2995: PP_2995 - putative DNA topology modulation kinase FlaR, at 3,392,215 to 3,392,757
_2995
PP_2996: PP_2996 - conserved protein of unknown function, at 3,392,820 to 3,393,278
_2996
PP_2997: PP_2997 - CnmA, at 3,393,507 to 3,394,406
_2997
PP_2998: PP_2998 - 2-dehydropantoate 2-reductase, at 3,394,500 to 3,395,447
_2998
Position (kb) 3393
3394
3395 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 3392.698 kb on - strand, within PP_2995 at 3392.784 kb on + strand at 3392.784 kb on + strand at 3392.784 kb on + strand at 3392.784 kb on + strand at 3392.785 kb on - strand at 3392.785 kb on - strand at 3392.785 kb on - strand at 3392.785 kb on - strand at 3392.785 kb on - strand at 3392.821 kb on + strand at 3392.821 kb on + strand at 3392.822 kb on - strand at 3392.822 kb on - strand at 3392.861 kb on - strand at 3392.879 kb on + strand, within PP_2996 at 3392.879 kb on + strand, within PP_2996 at 3392.880 kb on - strand, within PP_2996 at 3392.880 kb on - strand, within PP_2996 at 3392.915 kb on + strand, within PP_2996 at 3392.945 kb on + strand, within PP_2996 at 3392.946 kb on - strand, within PP_2996 at 3393.164 kb on - strand, within PP_2996 at 3393.173 kb on + strand, within PP_2996 at 3393.174 kb on - strand, within PP_2996 at 3393.174 kb on - strand, within PP_2996 at 3393.184 kb on + strand, within PP_2996 at 3393.185 kb on - strand, within PP_2996 at 3393.185 kb on - strand, within PP_2996 at 3393.185 kb on - strand, within PP_2996 at 3393.204 kb on + strand, within PP_2996 at 3393.204 kb on + strand, within PP_2996 at 3393.205 kb on - strand, within PP_2996 at 3393.273 kb on - strand at 3393.279 kb on - strand at 3393.290 kb on - strand at 3393.329 kb on + strand at 3393.329 kb on + strand at 3393.329 kb on + strand at 3393.330 kb on - strand at 3393.330 kb on - strand at 3393.335 kb on + strand at 3393.395 kb on - strand at 3393.473 kb on + strand at 3393.473 kb on + strand at 3393.474 kb on - strand at 3393.565 kb on + strand at 3393.631 kb on - strand, within PP_2997 at 3393.685 kb on - strand, within PP_2997 at 3393.702 kb on + strand, within PP_2997 at 3393.919 kb on + strand, within PP_2997 at 3393.919 kb on + strand, within PP_2997 at 3393.919 kb on + strand, within PP_2997 at 3393.919 kb on + strand, within PP_2997 at 3393.919 kb on + strand, within PP_2997 at 3393.920 kb on - strand, within PP_2997 at 3393.920 kb on - strand, within PP_2997 at 3393.920 kb on - strand, within PP_2997 at 3393.920 kb on - strand, within PP_2997 at 3393.920 kb on - strand, within PP_2997 at 3394.215 kb on - strand, within PP_2997 at 3394.348 kb on + strand at 3394.348 kb on + strand at 3394.348 kb on + strand at 3394.348 kb on + strand at 3394.348 kb on + strand at 3394.349 kb on - strand at 3394.443 kb on - strand at 3394.467 kb on + strand at 3394.468 kb on - strand at 3394.663 kb on + strand, within PP_2998 at 3394.664 kb on - strand, within PP_2998 at 3394.690 kb on + strand, within PP_2998 at 3394.774 kb on + strand, within PP_2998 at 3394.875 kb on + strand, within PP_2998 at 3394.875 kb on + strand, within PP_2998 at 3394.875 kb on + strand, within PP_2998 at 3394.876 kb on - strand, within PP_2998 at 3394.876 kb on - strand, within PP_2998 at 3394.876 kb on - strand, within PP_2998 at 3394.876 kb on - strand, within PP_2998 at 3395.122 kb on - strand, within PP_2998 at 3395.402 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 25C; with MOPS remove 3,392,698 - PP_2995 0.89 +1.0 3,392,784 + +0.5 3,392,784 + +0.0 3,392,784 + +0.7 3,392,784 + +1.3 3,392,785 - +0.4 3,392,785 - -0.2 3,392,785 - -5.0 3,392,785 - -0.9 3,392,785 - +0.2 3,392,821 + -0.5 3,392,821 + +1.4 3,392,822 - -4.2 3,392,822 - +0.2 3,392,861 - -3.1 3,392,879 + PP_2996 0.13 +0.3 3,392,879 + PP_2996 0.13 -0.1 3,392,880 - PP_2996 0.13 -4.2 3,392,880 - PP_2996 0.13 +0.1 3,392,915 + PP_2996 0.21 -3.2 3,392,945 + PP_2996 0.27 -4.9 3,392,946 - PP_2996 0.27 -1.6 3,393,164 - PP_2996 0.75 +0.9 3,393,173 + PP_2996 0.77 +1.6 3,393,174 - PP_2996 0.77 +0.6 3,393,174 - PP_2996 0.77 +0.4 3,393,184 + PP_2996 0.79 +0.8 3,393,185 - PP_2996 0.80 -2.9 3,393,185 - PP_2996 0.80 -0.8 3,393,185 - PP_2996 0.80 +1.4 3,393,204 + PP_2996 0.84 +0.2 3,393,204 + PP_2996 0.84 +0.6 3,393,205 - PP_2996 0.84 -0.5 3,393,273 - -0.3 3,393,279 - +0.3 3,393,290 - -0.2 3,393,329 + +1.8 3,393,329 + -0.3 3,393,329 + -4.9 3,393,330 - -1.5 3,393,330 - -1.1 3,393,335 + +0.6 3,393,395 - -2.1 3,393,473 + +1.1 3,393,473 + +0.4 3,393,474 - -1.7 3,393,565 + -2.2 3,393,631 - PP_2997 0.14 -0.7 3,393,685 - PP_2997 0.20 +0.6 3,393,702 + PP_2997 0.22 -3.8 3,393,919 + PP_2997 0.46 -3.3 3,393,919 + PP_2997 0.46 -1.9 3,393,919 + PP_2997 0.46 -1.2 3,393,919 + PP_2997 0.46 -4.6 3,393,919 + PP_2997 0.46 +0.2 3,393,920 - PP_2997 0.46 -0.6 3,393,920 - PP_2997 0.46 -1.3 3,393,920 - PP_2997 0.46 -4.3 3,393,920 - PP_2997 0.46 -0.2 3,393,920 - PP_2997 0.46 -1.7 3,394,215 - PP_2997 0.79 -0.7 3,394,348 + -0.2 3,394,348 + -0.3 3,394,348 + -0.4 3,394,348 + -0.3 3,394,348 + -2.1 3,394,349 - -0.1 3,394,443 - -0.4 3,394,467 + +1.5 3,394,468 - +0.5 3,394,663 + PP_2998 0.17 -0.1 3,394,664 - PP_2998 0.17 +0.6 3,394,690 + PP_2998 0.20 +0.5 3,394,774 + PP_2998 0.29 -1.1 3,394,875 + PP_2998 0.40 -1.1 3,394,875 + PP_2998 0.40 +1.8 3,394,875 + PP_2998 0.40 -0.3 3,394,876 - PP_2998 0.40 -4.1 3,394,876 - PP_2998 0.40 +0.7 3,394,876 - PP_2998 0.40 -1.1 3,394,876 - PP_2998 0.40 -2.3 3,395,122 - PP_2998 0.66 +0.3 3,395,402 + +1.4
Or see this region's nucleotide sequence