Experiment: Growth at 25C; with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0312 and PP_0313 are separated by 10 nucleotides PP_0313 and PP_0314 are separated by 601 nucleotides
PP_0312: PP_0312 - electron transfer flavoprotein, alpha subunit, at 374,711 to 375,943
_0312
PP_0313: PP_0313 - putative electron transfer flavoprotein beta subunit, at 375,954 to 376,724
_0313
PP_0314: PP_0314 - conserved protein of unknown function, at 377,326 to 378,057
_0314
Position (kb) 375
376
377 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 374.990 kb on + strand, within PP_0312 at 374.990 kb on + strand, within PP_0312 at 374.990 kb on + strand, within PP_0312 at 374.991 kb on - strand, within PP_0312 at 374.991 kb on - strand, within PP_0312 at 374.991 kb on - strand, within PP_0312 at 374.991 kb on - strand, within PP_0312 at 375.185 kb on + strand, within PP_0312 at 375.358 kb on + strand, within PP_0312 at 375.615 kb on - strand, within PP_0312 at 375.737 kb on + strand, within PP_0312 at 375.737 kb on + strand, within PP_0312 at 375.738 kb on - strand, within PP_0312 at 375.738 kb on - strand, within PP_0312 at 375.912 kb on - strand at 375.912 kb on - strand at 375.941 kb on + strand at 375.942 kb on - strand at 375.959 kb on + strand at 376.070 kb on + strand, within PP_0313 at 376.201 kb on - strand, within PP_0313 at 376.201 kb on - strand, within PP_0313 at 376.736 kb on + strand at 376.736 kb on + strand at 376.842 kb on - strand at 376.861 kb on - strand at 376.937 kb on + strand at 376.937 kb on + strand at 377.075 kb on - strand at 377.205 kb on + strand at 377.267 kb on + strand at 377.267 kb on + strand at 377.267 kb on + strand at 377.291 kb on - strand at 377.312 kb on + strand at 377.312 kb on + strand at 377.313 kb on - strand at 377.313 kb on - strand at 377.398 kb on + strand at 377.407 kb on + strand, within PP_0314 at 377.408 kb on - strand, within PP_0314 at 377.423 kb on + strand, within PP_0314 at 377.478 kb on + strand, within PP_0314 at 377.478 kb on + strand, within PP_0314 at 377.478 kb on + strand, within PP_0314 at 377.479 kb on - strand, within PP_0314 at 377.479 kb on - strand, within PP_0314 at 377.479 kb on - strand, within PP_0314 at 377.479 kb on - strand, within PP_0314 at 377.482 kb on + strand at 377.482 kb on + strand, within PP_0314 at 377.483 kb on - strand, within PP_0314 at 377.510 kb on - strand, within PP_0314 at 377.534 kb on + strand, within PP_0314 at 377.534 kb on + strand, within PP_0314 at 377.549 kb on + strand, within PP_0314 at 377.581 kb on + strand, within PP_0314 at 377.581 kb on + strand, within PP_0314 at 377.581 kb on + strand, within PP_0314 at 377.622 kb on + strand, within PP_0314 at 377.684 kb on + strand, within PP_0314 at 377.684 kb on + strand, within PP_0314 at 377.684 kb on + strand, within PP_0314 at 377.685 kb on - strand, within PP_0314 at 377.685 kb on - strand, within PP_0314 at 377.685 kb on - strand, within PP_0314 at 377.689 kb on - strand, within PP_0314 at 377.690 kb on + strand, within PP_0314 at 377.690 kb on + strand, within PP_0314 at 377.690 kb on + strand, within PP_0314 at 377.690 kb on + strand, within PP_0314 at 377.690 kb on + strand, within PP_0314 at 377.691 kb on - strand, within PP_0314 at 377.691 kb on - strand, within PP_0314 at 377.691 kb on - strand, within PP_0314 at 377.716 kb on + strand, within PP_0314 at 377.716 kb on + strand, within PP_0314 at 377.721 kb on + strand, within PP_0314 at 377.721 kb on + strand, within PP_0314 at 377.721 kb on + strand, within PP_0314 at 377.722 kb on - strand, within PP_0314 at 377.722 kb on - strand, within PP_0314
Per-strain Table
Position Strand Gene LocusTag Fraction Growth at 25C; with MOPS remove 374,990 + PP_0312 0.23 -0.9 374,990 + PP_0312 0.23 +0.9 374,990 + PP_0312 0.23 +0.2 374,991 - PP_0312 0.23 -1.3 374,991 - PP_0312 0.23 +1.3 374,991 - PP_0312 0.23 -0.5 374,991 - PP_0312 0.23 -4.0 375,185 + PP_0312 0.38 -3.9 375,358 + PP_0312 0.52 -3.1 375,615 - PP_0312 0.73 +0.1 375,737 + PP_0312 0.83 +0.2 375,737 + PP_0312 0.83 +0.2 375,738 - PP_0312 0.83 -2.9 375,738 - PP_0312 0.83 +0.7 375,912 - -1.4 375,912 - -2.7 375,941 + -0.5 375,942 - -0.4 375,959 + -4.2 376,070 + PP_0313 0.15 +0.8 376,201 - PP_0313 0.32 +0.9 376,201 - PP_0313 0.32 +1.1 376,736 + +0.8 376,736 + -0.3 376,842 - +0.6 376,861 - +0.9 376,937 + -0.2 376,937 + +0.8 377,075 - -2.8 377,205 + +0.8 377,267 + +0.7 377,267 + +0.3 377,267 + -1.3 377,291 - +1.0 377,312 + +0.3 377,312 + -0.8 377,313 - -0.4 377,313 - +0.9 377,398 + +0.9 377,407 + PP_0314 0.11 -0.5 377,408 - PP_0314 0.11 -1.5 377,423 + PP_0314 0.13 -2.4 377,478 + PP_0314 0.21 -0.9 377,478 + PP_0314 0.21 -0.3 377,478 + PP_0314 0.21 -3.0 377,479 - PP_0314 0.21 -0.6 377,479 - PP_0314 0.21 -1.3 377,479 - PP_0314 0.21 +1.4 377,479 - PP_0314 0.21 +0.7 377,482 + +1.8 377,482 + PP_0314 0.21 +0.2 377,483 - PP_0314 0.21 -1.0 377,510 - PP_0314 0.25 +1.2 377,534 + PP_0314 0.28 +0.0 377,534 + PP_0314 0.28 -1.4 377,549 + PP_0314 0.30 -0.5 377,581 + PP_0314 0.35 -1.4 377,581 + PP_0314 0.35 +0.9 377,581 + PP_0314 0.35 +0.8 377,622 + PP_0314 0.40 +0.3 377,684 + PP_0314 0.49 +0.5 377,684 + PP_0314 0.49 -3.7 377,684 + PP_0314 0.49 +1.2 377,685 - PP_0314 0.49 -2.6 377,685 - PP_0314 0.49 +0.8 377,685 - PP_0314 0.49 -2.1 377,689 - PP_0314 0.50 +0.6 377,690 + PP_0314 0.50 -1.0 377,690 + PP_0314 0.50 +1.1 377,690 + PP_0314 0.50 +1.0 377,690 + PP_0314 0.50 -0.9 377,690 + PP_0314 0.50 +0.5 377,691 - PP_0314 0.50 -4.8 377,691 - PP_0314 0.50 -0.7 377,691 - PP_0314 0.50 +0.5 377,716 + PP_0314 0.53 +0.3 377,716 + PP_0314 0.53 +0.5 377,721 + PP_0314 0.54 -2.4 377,721 + PP_0314 0.54 +0.4 377,721 + PP_0314 0.54 -0.1 377,722 - PP_0314 0.54 +0.5 377,722 - PP_0314 0.54 -4.1
Or see this region's nucleotide sequence