Experiment: R2A with Vogels_fungal_media 0.8X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03975 and PS417_03980 are separated by 44 nucleotides PS417_03980 and PS417_03985 are separated by 99 nucleotides
PS417_03975: PS417_03975 - FruA, at 889,319 to 891,028
_03975
PS417_03980: PS417_03980 - alkaline phosphatase, at 891,073 to 892,614
_03980
PS417_03985: PS417_03985 - flavodoxin, at 892,714 to 895,239
_03985
Position (kb) 891
892
893 Strain fitness (log2 ratio) -2
-1
0
1
2 at 890.193 kb on - strand, within PS417_03975 at 890.201 kb on + strand, within PS417_03975 at 890.289 kb on + strand, within PS417_03975 at 890.573 kb on + strand, within PS417_03975 at 890.672 kb on - strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.846 kb on + strand, within PS417_03975 at 890.927 kb on + strand at 890.973 kb on - strand at 891.040 kb on - strand at 891.290 kb on + strand, within PS417_03980 at 891.559 kb on + strand, within PS417_03980 at 891.617 kb on - strand, within PS417_03980 at 891.676 kb on - strand, within PS417_03980 at 891.676 kb on - strand, within PS417_03980 at 891.733 kb on + strand, within PS417_03980 at 891.914 kb on - strand, within PS417_03980 at 891.914 kb on - strand, within PS417_03980 at 891.973 kb on + strand, within PS417_03980 at 891.974 kb on - strand, within PS417_03980 at 892.143 kb on + strand, within PS417_03980 at 892.158 kb on - strand at 892.172 kb on + strand, within PS417_03980 at 892.172 kb on + strand, within PS417_03980 at 892.296 kb on - strand, within PS417_03980 at 892.318 kb on + strand, within PS417_03980 at 892.336 kb on + strand, within PS417_03980 at 892.336 kb on + strand, within PS417_03980 at 892.529 kb on + strand at 892.530 kb on - strand at 892.530 kb on - strand at 892.530 kb on - strand at 892.530 kb on - strand at 892.530 kb on - strand at 892.663 kb on + strand at 892.777 kb on + strand at 892.777 kb on + strand at 892.778 kb on - strand at 892.778 kb on - strand at 892.778 kb on - strand at 892.835 kb on + strand at 892.835 kb on + strand at 892.836 kb on - strand at 892.836 kb on - strand at 892.863 kb on + strand at 892.864 kb on - strand at 892.864 kb on - strand at 893.301 kb on - strand, within PS417_03985 at 893.564 kb on - strand, within PS417_03985
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Vogels_fungal_media 0.8X remove 890,193 - PS417_03975 0.51 +0.2 890,201 + PS417_03975 0.52 -1.1 890,289 + PS417_03975 0.57 -0.5 890,573 + PS417_03975 0.73 -0.1 890,672 - PS417_03975 0.79 -2.4 890,846 + PS417_03975 0.89 +0.1 890,846 + PS417_03975 0.89 +0.4 890,846 + PS417_03975 0.89 +0.5 890,927 + -0.4 890,973 - +2.6 891,040 - -0.3 891,290 + PS417_03980 0.14 -0.3 891,559 + PS417_03980 0.32 +0.8 891,617 - PS417_03980 0.35 -0.4 891,676 - PS417_03980 0.39 -1.0 891,676 - PS417_03980 0.39 -0.8 891,733 + PS417_03980 0.43 -0.4 891,914 - PS417_03980 0.55 -0.2 891,914 - PS417_03980 0.55 -0.3 891,973 + PS417_03980 0.58 -0.0 891,974 - PS417_03980 0.58 -0.4 892,143 + PS417_03980 0.69 +0.1 892,158 - +2.4 892,172 + PS417_03980 0.71 -0.3 892,172 + PS417_03980 0.71 -1.2 892,296 - PS417_03980 0.79 -0.6 892,318 + PS417_03980 0.81 -1.2 892,336 + PS417_03980 0.82 -0.0 892,336 + PS417_03980 0.82 +1.8 892,529 + -0.0 892,530 - -0.5 892,530 - -0.7 892,530 - -0.5 892,530 - +0.2 892,530 - -0.4 892,663 + -0.1 892,777 + -0.1 892,777 + -0.4 892,778 - -0.0 892,778 - -0.2 892,778 - -0.1 892,835 + -0.7 892,835 + -1.7 892,836 - -1.5 892,836 - -0.7 892,863 + -0.2 892,864 - -0.1 892,864 - +0.3 893,301 - PS417_03985 0.23 +0.3 893,564 - PS417_03985 0.34 -0.4
Or see this region's nucleotide sequence