Strain Fitness in Pseudomonas simiae WCS417 around PS417_00475

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
93,122	+		PS417_00470	0.33	+1.5
93,289	-		PS417_00470	0.46	+0.6
93,495	+		PS417_00470	0.61	+1.1
93,628	-		PS417_00470	0.71	-1.3
93,628	-		PS417_00470	0.71	-0.2
93,663	+		PS417_00470	0.74	-0.5
93,663	+		PS417_00470	0.74	-0.1
93,664	-		PS417_00470	0.74	-0.9
93,664	-		PS417_00470	0.74	-0.5
93,731	+		PS417_00470	0.79	-0.6
93,732	-		PS417_00470	0.79	-0.4
93,915	+				-0.4
93,915	+				-1.3
93,915	+				-1.1
93,915	+				+0.2
93,915	+				-1.7
93,916	-				-0.1
93,916	-				-0.8
93,916	-				-0.7
94,072	+				-0.1
94,725	-		PS417_00475	0.50	-0.8
94,725	-		PS417_00475	0.50	-1.7
94,886	+		PS417_00475	0.63	-0.6
94,909	+		PS417_00475	0.65	-1.8
95,207	+		PS417_00475	0.90	-0.7
95,207	+		PS417_00475	0.90	-2.4
95,207	+		PS417_00475	0.90	-0.8
95,208	-		PS417_00475	0.90	-0.5
95,208	-		PS417_00475	0.90	-1.2
95,208	-		PS417_00475	0.90	-1.2
95,223	-				-0.6
95,318	+				-1.5
95,319	-				-0.8
95,374	+				+0.3
95,375	-				+0.3
95,375	-				-0.2
95,698	+		PS417_00480	0.42	-0.7
95,699	-		PS417_00480	0.42	-0.3
95,717	+		PS417_00480	0.45	-1.1
95,768	+		PS417_00480	0.54	+0.1
95,821	+		PS417_00480	0.62	+0.8
96,018	+				-0.2
96,019	-				-0.0
96,030	+				-0.4