Strain Fitness in Pseudomonas simiae WCS417 around PS417_20595

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
4,474,959	+				-0.4
4,474,960	-				-0.6
4,475,137	+		PS417_20590	0.27	-0.2
4,475,137	+		PS417_20590	0.27	-0.3
4,475,137	+		PS417_20590	0.27	-0.2
4,475,138	-		PS417_20590	0.27	-0.4
4,475,267	+		PS417_20590	0.42	-1.8
4,475,267	+		PS417_20590	0.42	-1.1
4,475,267	+		PS417_20590	0.42	+0.0
4,475,267	+		PS417_20590	0.42	-1.5
4,475,268	-		PS417_20590	0.42	-0.8
4,475,268	-		PS417_20590	0.42	-1.2
4,475,494	+		PS417_20590	0.67	-0.5
4,475,495	-		PS417_20590	0.67	+0.2
4,475,575	-		PS417_20590	0.76	+0.2
4,475,587	+		PS417_20590	0.77	+0.0
4,475,587	+		PS417_20590	0.77	+0.2
4,475,588	-		PS417_20590	0.77	-0.2
4,475,596	+		PS417_20590	0.78	-0.8
4,475,629	-		PS417_20590	0.82	-0.2
4,475,649	+		PS417_20590	0.84	-0.3
4,475,719	+				+0.7
4,475,720	-				-0.6
4,475,720	-				-1.2
4,475,720	-				-0.5
4,475,876	+				-1.4
4,475,876	+				+1.3
4,475,877	-				+0.7
4,475,877	-				+0.1
4,475,886	-				+0.0
4,475,886	-				+0.9
4,476,048	+		PS417_20595	0.14	+0.4
4,476,051	-		PS417_20595	0.14	+0.3
4,476,059	+		PS417_20595	0.15	+0.0
4,476,081	+		PS417_20595	0.18	+0.3
4,476,083	+		PS417_20595	0.18	-0.2
4,476,083	+		PS417_20595	0.18	+0.0
4,476,083	+		PS417_20595	0.18	+0.7
4,476,084	-		PS417_20595	0.18	+0.3
4,476,192	+		PS417_20595	0.33	-0.0
4,476,231	-		PS417_20595	0.38	-1.3
4,476,428	+		PS417_20595	0.64	-0.1
4,476,428	+		PS417_20595	0.64	+0.6
4,476,428	+		PS417_20595	0.64	+0.7
4,476,446	-				-1.4
4,476,474	-		PS417_20595	0.71	+0.4
4,476,610	+		PS417_20595	0.89	+0.1
4,476,610	+		PS417_20595	0.89	-0.1
4,476,611	-		PS417_20595	0.89	+0.2
4,476,611	-		PS417_20595	0.89	+0.5
4,476,652	+				+0.1
4,476,672	+				+0.1
4,476,672	+				+0.6
4,476,679	+				+0.9
4,476,691	+				+0.5
4,476,747	-				-0.7
4,476,770	+				-0.4
4,476,770	+				-0.2
4,476,771	-				-0.0
4,476,821	+				-0.2
4,476,823	+				+1.1
4,476,871	-				-1.0
4,477,065	+		PS417_20600	0.20	-0.9
4,477,093	-				+1.3
4,477,093	-		PS417_20600	0.22	+0.2
4,477,192	+		PS417_20600	0.30	-0.4
4,477,228	+		PS417_20600	0.34	+0.6
4,477,229	-		PS417_20600	0.34	+0.1
4,477,239	+		PS417_20600	0.34	-0.1
4,477,316	+		PS417_20600	0.41	-0.1
4,477,316	+		PS417_20600	0.41	+1.0
4,477,316	+		PS417_20600	0.41	+0.5
4,477,316	+		PS417_20600	0.41	+0.2
4,477,317	-		PS417_20600	0.41	+0.2
4,477,317	-		PS417_20600	0.41	-0.0
4,477,346	+		PS417_20600	0.44	+0.2
4,477,355	+		PS417_20600	0.44	+0.0
4,477,438	-		PS417_20600	0.51	-0.1
4,477,485	-		PS417_20600	0.55	+0.2
4,477,503	-		PS417_20600	0.57	-0.9
4,477,507	-		PS417_20600	0.57	-0.1
4,477,562	+		PS417_20600	0.62	+0.3
4,477,602	+		PS417_20600	0.65	+0.6
4,477,603	-		PS417_20600	0.65	+0.2
4,477,606	-				+0.2
4,477,606	-		PS417_20600	0.66	-0.0
4,477,662	-		PS417_20600	0.71	-0.2