Strain Fitness in Pseudomonas simiae WCS417 around PS417_15200

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
3,332,080	+				-0.2
3,332,080	+				+1.0
3,332,080	+				-0.1
3,332,081	-				-1.2
3,332,085	+				+0.6
3,332,086	-				-0.1
3,332,123	-				+0.6
3,332,266	+				-0.2
3,332,266	+				+0.6
3,332,284	+				-0.2
3,332,285	-				-0.3
3,332,298	-				+0.3
3,332,505	-				-0.6
3,332,572	+				-0.2
3,332,573	-				-0.1
3,332,608	+				-0.6
3,332,688	+				+0.6
3,333,132	+		PS417_15200	0.21	-0.5
3,333,132	+		PS417_15200	0.21	-1.4
3,333,145	+				+0.0
3,333,146	-		PS417_15200	0.24	-0.7
3,333,198	+				+1.3
3,333,460	+		PS417_15200	0.87	-0.6
3,333,566	+				-0.3
3,333,643	+				-0.4
3,333,678	+				-0.8
3,333,714	+				-0.4
3,333,721	-				+1.6
3,333,826	+				-1.6
3,333,826	+				-0.6
3,333,830	+				-1.0
3,333,831	-				+0.1
3,333,831	-				+0.6
3,333,947	-				-0.4
3,333,947	-				+0.4
3,334,133	+		PS417_15205	0.14	-0.3
3,334,133	+		PS417_15205	0.14	-0.4
3,334,134	-		PS417_15205	0.14	+0.4
3,334,178	+		PS417_15205	0.17	-1.4
3,334,252	+		PS417_15205	0.22	+0.5
3,334,252	+		PS417_15205	0.22	+0.4
3,334,270	+		PS417_15205	0.23	+0.0
3,334,271	-		PS417_15205	0.23	+0.2
3,334,276	+		PS417_15205	0.23	+0.0
3,334,277	-		PS417_15205	0.23	-0.3
3,334,293	-		PS417_15205	0.25	-0.5
3,334,390	-		PS417_15205	0.31	+0.7
3,334,490	+		PS417_15205	0.38	-0.4
3,334,490	+		PS417_15205	0.38	-0.5