Strain Fitness in Pseudomonas simiae WCS417 around PS417_15020

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
3,282,465	+		PS417_15010	0.64	+0.2
3,282,465	+		PS417_15010	0.64	+0.1
3,282,465	+		PS417_15010	0.64	-0.2
3,282,466	-		PS417_15010	0.65	-0.2
3,282,466	-		PS417_15010	0.65	-1.2
3,282,466	-		PS417_15010	0.65	-0.0
3,282,466	-		PS417_15010	0.65	-0.0
3,282,466	-		PS417_15010	0.65	-0.2
3,282,471	+		PS417_15010	0.65	-0.1
3,282,499	-		PS417_15010	0.70	+0.1
3,282,500	+		PS417_15010	0.70	-1.2
3,282,500	+		PS417_15010	0.70	-0.4
3,282,501	-		PS417_15010	0.71	-0.1
3,282,768	-				-0.1
3,282,822	-				+0.2
3,282,900	+				+0.5
3,282,903	-				-0.4
3,283,402	-				-0.3
3,283,402	-				-1.0
3,283,480	+				-1.2
3,283,481	-				-0.5
3,283,609	+		PS417_15020	0.18	-0.3
3,283,680	-		PS417_15020	0.25	-1.0
3,283,680	-		PS417_15020	0.25	-0.8
3,283,945	+		PS417_15020	0.53	-0.8
3,283,978	+		PS417_15020	0.57	-0.3
3,283,978	+		PS417_15020	0.57	-0.7
3,284,136	-		PS417_15020	0.73	-0.2
3,284,335	+				-0.4
3,284,335	+				+0.3
3,284,336	-				-2.7
3,284,336	-				-1.1
3,284,336	-				-0.2
3,284,430	+				-0.1
3,284,430	+				-0.9
3,284,430	+				-0.2
3,284,431	-				-0.4
3,284,431	-				+0.3
3,284,433	+				-0.3
3,284,433	+				-0.3
3,284,434	-				+1.0
3,284,472	+				-0.3
3,284,590	+				-0.4
3,284,668	+		PS417_15025	0.14	+0.5
3,284,668	+		PS417_15025	0.14	-0.5
3,284,668	+		PS417_15025	0.14	+0.2
3,284,669	-		PS417_15025	0.14	+0.0
3,284,669	-		PS417_15025	0.14	+0.3
3,284,809	+		PS417_15025	0.27	-0.2
3,284,810	-		PS417_15025	0.27	+0.2
3,284,851	+				-0.4
3,285,104	+		PS417_15025	0.55	+0.4
3,285,324	+		PS417_15025	0.75	-0.1
3,285,324	+		PS417_15025	0.75	-0.1
3,285,325	-		PS417_15025	0.75	-0.1
3,285,382	+		PS417_15025	0.81	-0.0