Strain Fitness in Pseudomonas simiae WCS417 around PS417_07755

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,705,259	-		PS417_07745	0.75	-0.8
1,705,314	+				+0.6
1,705,345	+		PS417_07745	0.83	+0.2
1,705,427	+				+0.4
1,705,428	-				+0.3
1,705,436	-				+0.8
1,705,516	+				+0.3
1,705,611	+		PS417_07750	0.37	-0.4
1,705,611	+		PS417_07750	0.37	-0.1
1,705,612	-		PS417_07750	0.38	-0.0
1,705,633	+		PS417_07750	0.45	+0.6
1,705,634	-		PS417_07750	0.45	-0.2
1,705,634	-		PS417_07750	0.45	-0.4
1,705,661	+		PS417_07750	0.55	+1.4
1,705,679	+		PS417_07750	0.61	-0.3
1,705,758	-		PS417_07750	0.88	-0.2
1,705,758	-		PS417_07750	0.88	+0.1
1,705,758	-		PS417_07750	0.88	-0.4
1,705,758	-		PS417_07750	0.88	+0.6
1,705,850	+				-0.1
1,705,850	+				-1.1
1,705,850	+				+1.0
1,705,850	+				+0.1
1,705,851	-				+0.7
1,705,851	-				+0.0
1,705,948	+				-0.7
1,705,948	+				-0.2
1,706,010	+				-0.0
1,706,010	+				-0.2
1,706,011	-				-0.2
1,706,122	+				+0.3
1,706,122	+				+0.5
1,706,122	+				+0.2
1,706,122	+				-0.4
1,706,122	+				+0.2
1,706,123	-				-0.1
1,706,396	+		PS417_07755	0.17	-1.1
1,706,457	+		PS417_07755	0.23	-0.6
1,706,483	-		PS417_07755	0.26	-1.6
1,706,581	-		PS417_07755	0.36	-0.8
1,706,596	+		PS417_07755	0.38	+0.8
1,706,597	-		PS417_07755	0.38	-2.1
1,706,597	-		PS417_07755	0.38	+0.1
1,706,597	-		PS417_07755	0.38	+0.3
1,706,618	+		PS417_07755	0.40	-1.1
1,706,720	+		PS417_07755	0.50	-0.9
1,706,721	-		PS417_07755	0.50	+0.2
1,706,900	+		PS417_07755	0.68	-0.4
1,706,900	+		PS417_07755	0.68	-1.3
1,706,900	+		PS417_07755	0.68	-1.1
1,706,919	+		PS417_07755	0.70	-0.6
1,706,919	+		PS417_07755	0.70	+0.6
1,706,919	+		PS417_07755	0.70	-0.3
1,706,919	+		PS417_07755	0.70	-0.7
1,706,919	+		PS417_07755	0.70	-1.0
1,706,919	+		PS417_07755	0.70	-0.9
1,706,920	-		PS417_07755	0.70	-1.3
1,706,920	-		PS417_07755	0.70	-0.6
1,706,920	-		PS417_07755	0.70	-0.5
1,706,920	-		PS417_07755	0.70	-1.3
1,706,923	+		PS417_07755	0.71	-1.4
1,706,923	+		PS417_07755	0.71	-1.4
1,706,923	+		PS417_07755	0.71	-0.9
1,706,924	-		PS417_07755	0.71	-0.9
1,707,043	-		PS417_07755	0.83	+0.4
1,707,043	-		PS417_07755	0.83	-1.0
1,707,184	+				-0.4
1,707,184	+				-1.4
1,707,190	+				-0.6
1,707,191	-				-1.6
1,707,191	-				-1.3
1,707,191	-				+0.3
1,707,191	-				+1.0
1,707,232	-				-0.1
1,707,241	-				-0.5
1,707,243	+				+1.6
1,707,243	+				-0.4
1,707,421	+		PS417_07760	0.29	+0.4
1,707,421	+		PS417_07760	0.29	-0.6
1,707,422	-		PS417_07760	0.29	-0.7
1,707,422	-		PS417_07760	0.29	-2.1
1,707,453	-		PS417_07760	0.35	+0.1
1,707,545	+		PS417_07760	0.52	-1.3
1,707,545	+		PS417_07760	0.52	-0.0
1,707,546	-		PS417_07760	0.52	+1.4
1,707,546	-		PS417_07760	0.52	-0.4
1,707,623	+		PS417_07760	0.67	-0.3
1,707,686	-		PS417_07760	0.79	-0.2
1,707,689	+		PS417_07760	0.79	-0.3
1,707,690	-		PS417_07760	0.79	+0.2
1,707,866	+				-0.2
1,707,866	+				+0.1
1,707,915	-		PS417_07765	0.21	+0.0
1,707,917	+		PS417_07765	0.22	-0.0
1,707,968	+		PS417_07765	0.45	+0.1
1,707,968	+		PS417_07765	0.45	-0.4
1,708,057	+		PS417_07765	0.85	-0.3
1,708,080	-				+0.2
1,708,080	-				+0.0
1,708,136	-				+1.4
1,708,173	-				-0.2
1,708,181	-				-0.1
1,708,190	-				-0.4