Strain Fitness in Pseudomonas simiae WCS417 around PS417_05895

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,308,964	+		PS417_05890	0.49	+0.3
1,309,471	+				-0.3
1,309,472	-				+0.6
1,309,624	-				+0.5
1,309,798	+		PS417_05895	0.19	-0.1
1,309,798	+		PS417_05895	0.19	+0.1
1,309,798	+		PS417_05895	0.19	+0.1
1,309,799	-		PS417_05895	0.19	+0.4
1,309,799	-		PS417_05895	0.19	+0.1
1,309,984	+		PS417_05895	0.35	-0.2
1,309,984	+		PS417_05895	0.35	-0.7
1,309,984	+		PS417_05895	0.35	+0.0
1,309,984	+		PS417_05895	0.35	-0.6
1,309,985	-		PS417_05895	0.35	-0.6
1,309,985	-		PS417_05895	0.35	+0.9
1,309,985	-		PS417_05895	0.35	+0.0
1,309,985	-		PS417_05895	0.35	-0.3
1,309,985	-		PS417_05895	0.35	+0.0
1,309,985	-		PS417_05895	0.35	+1.4
1,310,056	+		PS417_05895	0.41	-0.1
1,310,367	+		PS417_05895	0.68	-0.3
1,310,367	+		PS417_05895	0.68	+0.6
1,310,368	-		PS417_05895	0.68	-1.2
1,310,390	-		PS417_05895	0.70	-0.5
1,310,413	+		PS417_05895	0.72	-0.5
1,310,413	+		PS417_05895	0.72	+0.1
1,310,413	+		PS417_05895	0.72	+0.4
1,310,413	+		PS417_05895	0.72	-0.7
1,310,414	-		PS417_05895	0.72	+0.7
1,310,414	-		PS417_05895	0.72	-0.4
1,310,414	-		PS417_05895	0.72	+0.3
1,310,518	-		PS417_05895	0.81	+0.0
1,310,518	-		PS417_05895	0.81	+0.1
1,310,522	+		PS417_05895	0.81	-0.3
1,310,522	+		PS417_05895	0.81	+0.4
1,310,522	+		PS417_05895	0.81	+0.3
1,310,523	-		PS417_05895	0.81	-0.2
1,310,523	-				+2.1
1,310,523	-		PS417_05895	0.81	+0.0
1,310,557	+		PS417_05895	0.84	+0.6
1,310,621	-		PS417_05895	0.89	+0.6
1,310,673	-				-1.6
1,310,673	-				+0.4
1,311,193	-		PS417_05900	0.75	-0.1
1,311,193	-		PS417_05900	0.75	+0.2
1,311,344	-				+0.0
1,311,474	+				+0.2
1,311,474	+				+0.0
1,311,480	+				+0.2
1,311,485	+				+0.1
1,311,485	+				+0.3
1,311,485	+				-0.3
1,311,485	+				+1.9
1,311,485	+				-0.0
1,311,485	+				-0.0
1,311,486	-				+2.0
1,311,570	+				+0.2
1,311,571	-				-0.1
1,311,571	-				-0.3
1,311,612	-				+0.0
1,311,619	-		PS417_05905	0.11	-0.4