Strain Fitness in Pseudomonas simiae WCS417 around PS417_05095

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,132,247	-		PS417_05090	0.71	+0.2
1,132,421	+		PS417_05090	0.79	-0.9
1,132,615	-		PS417_05090	0.87	-0.8
1,132,689	+				-0.1
1,132,694	-				-0.8
1,132,875	-				-0.3
1,133,119	+		PS417_05095	0.11	+0.1
1,133,344	+		PS417_05095	0.35	+0.2
1,133,344	+		PS417_05095	0.35	+0.6
1,133,394	-		PS417_05095	0.40	+0.1
1,133,657	+		PS417_05095	0.68	-0.3
1,133,658	-				-1.0
1,133,658	-		PS417_05095	0.68	+1.5
1,133,658	-		PS417_05095	0.68	+0.4
1,133,954	+				-2.6
1,134,016	+		PS417_05100	0.13	+0.3
1,134,016	+		PS417_05100	0.13	-0.3
1,134,202	-		PS417_05100	0.51	+0.1
1,134,408	+				-0.8
1,134,408	+				+1.6
1,134,408	+				-0.8
1,134,409	-				-0.1
1,134,471	-				+0.2
1,134,641	-		PS417_05105	0.10	-1.5
1,134,787	+		PS417_05105	0.58	-0.8
1,134,787	+		PS417_05105	0.58	-0.4
1,134,788	-		PS417_05105	0.59	-0.2
1,134,788	-		PS417_05105	0.59	+0.5