Strain Fitness in Pseudomonas simiae WCS417 around PS417_22850

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
4,950,882	+		PS417_22845	0.67	-1.7
4,950,883	-		PS417_22845	0.67	+0.7
4,950,915	+		PS417_22845	0.68	-1.8
4,950,915	+		PS417_22845	0.68	-1.9
4,950,916	-		PS417_22845	0.68	-0.4
4,951,006	-		PS417_22845	0.72	-3.0
4,951,032	+		PS417_22845	0.73	-2.0
4,951,032	+		PS417_22845	0.73	-3.4
4,951,033	-		PS417_22845	0.73	-1.1
4,951,035	+				-0.8
4,951,035	+		PS417_22845	0.73	-0.8
4,951,035	+		PS417_22845	0.73	-3.6
4,951,035	+		PS417_22845	0.73	+0.4
4,951,035	+		PS417_22845	0.73	-2.5
4,951,035	+		PS417_22845	0.73	-2.4
4,951,036	-		PS417_22845	0.73	-3.6
4,951,037	+		PS417_22845	0.73	-3.1
4,951,037	+		PS417_22845	0.73	-2.0
4,951,256	-		PS417_22845	0.81	-2.4
4,951,297	-		PS417_22845	0.83	-3.8
4,951,371	+		PS417_22845	0.86	+0.1
4,951,371	+		PS417_22845	0.86	-3.1
4,951,372	-		PS417_22845	0.86	-2.8
4,951,372	-		PS417_22845	0.86	-2.3
4,951,372	-		PS417_22845	0.86	-0.7
4,951,467	+		PS417_22845	0.89	-3.3
4,951,467	+		PS417_22845	0.89	-2.2
4,951,468	-		PS417_22845	0.89	-1.9
4,951,469	+		PS417_22845	0.89	-2.9
4,951,469	+		PS417_22845	0.89	-2.4
4,951,470	-		PS417_22845	0.89	-0.2
4,951,470	-		PS417_22845	0.89	-1.2
4,951,482	+		PS417_22845	0.90	-3.0
4,951,594	-				-2.5
4,951,595	+				-3.6
4,951,654	-				-3.2
4,951,773	+				-1.4
4,951,773	+				-2.0
4,951,774	-				-1.3
4,951,774	-				-4.3
4,951,774	-				-2.3
4,951,786	-				-3.0
4,951,786	-				-1.7
4,952,561	+		PS417_22850	0.64	-1.2
4,952,696	+		PS417_22850	0.74	-0.6
4,952,696	+		PS417_22850	0.74	-2.4
4,952,696	+		PS417_22850	0.74	-2.7
4,952,697	-		PS417_22850	0.74	-4.4
4,952,697	-		PS417_22850	0.74	+0.0
4,952,697	-		PS417_22850	0.74	-2.4
4,952,741	-		PS417_22850	0.78	-2.7
4,952,741	-		PS417_22850	0.78	-2.8
4,952,741	-		PS417_22850	0.78	-2.2
4,952,784	+		PS417_22850	0.81	-1.0
4,953,025	+				-0.5
4,953,233	+				+0.1
4,953,752	+		PS417_22855	0.35	-0.1
4,953,752	+		PS417_22855	0.35	-0.9