Strain Fitness in Pseudomonas simiae WCS417 around PS417_09540

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
2,064,911	+				-0.1
2,064,915	+				-1.1
2,064,916	-				+0.1
2,064,916	-				+0.2
2,064,916	-				-0.7
2,065,198	+				+0.8
2,065,304	+				+0.2
2,065,304	+				-0.7
2,065,304	+				+0.1
2,065,304	+				-0.6
2,065,304	+				-1.9
2,065,305	-				+0.4
2,065,305	-				+0.1
2,065,321	-				+0.0
2,065,321	-				-0.8
2,065,321	-				-0.4
2,065,375	+				+0.8
2,065,376	-				-0.6
2,065,400	+		PS417_09540	0.11	-0.4
2,065,400	+		PS417_09540	0.11	-0.7
2,065,401	-		PS417_09540	0.11	-0.3
2,065,401	-				+0.0
2,065,401	-		PS417_09540	0.11	-0.1
2,065,443	-		PS417_09540	0.14	-0.5
2,065,443	-		PS417_09540	0.14	+1.0
2,065,443	-		PS417_09540	0.14	+0.0
2,065,540	-		PS417_09540	0.19	-0.4
2,065,595	+		PS417_09540	0.22	+0.3
2,065,596	-		PS417_09540	0.22	-1.1
2,065,662	+		PS417_09540	0.25	-0.3
2,065,663	-		PS417_09540	0.25	-0.3
2,065,663	-		PS417_09540	0.25	-0.7
2,065,663	-		PS417_09540	0.25	-0.2
2,065,663	-		PS417_09540	0.25	-0.9
2,065,721	+		PS417_09540	0.28	-1.7
2,065,725	+		PS417_09540	0.28	+0.6
2,065,818	-		PS417_09540	0.33	-0.3
2,065,842	+		PS417_09540	0.35	+1.4
2,065,843	-		PS417_09540	0.35	-1.0
2,065,843	-		PS417_09540	0.35	-0.7
2,065,843	-		PS417_09540	0.35	-0.7
2,065,843	-		PS417_09540	0.35	-0.3
2,065,848	-		PS417_09540	0.35	+0.8
2,065,848	-		PS417_09540	0.35	-0.7
2,065,934	-		PS417_09540	0.39	-0.7
2,066,042	-		PS417_09540	0.45	-0.8
2,066,093	+		PS417_09540	0.48	+0.6
2,066,154	-				-0.3
2,066,246	+		PS417_09540	0.56	-1.1
2,066,250	-		PS417_09540	0.56	-0.4
2,066,348	+		PS417_09540	0.61	+1.0
2,066,361	+		PS417_09540	0.62	-0.3
2,066,361	+		PS417_09540	0.62	-0.6
2,066,362	-		PS417_09540	0.62	-1.2
2,066,396	+		PS417_09540	0.64	-0.8
2,066,396	+		PS417_09540	0.64	-1.5
2,066,397	-		PS417_09540	0.64	-0.7
2,066,546	+				-1.0
2,066,547	-		PS417_09540	0.72	-0.1
2,066,547	-		PS417_09540	0.72	-0.1
2,066,547	-		PS417_09540	0.72	-0.5
2,066,547	-		PS417_09540	0.72	+0.3
2,066,547	-		PS417_09540	0.72	-0.7
2,066,844	-		PS417_09540	0.88	+0.8
2,066,844	-		PS417_09540	0.88	-0.5
2,066,844	-		PS417_09540	0.88	+0.2
2,067,108	-				+0.4
2,067,152	-		PS417_09545	0.18	-1.5
2,067,152	-		PS417_09545	0.18	+0.1
2,067,486	+				+0.1
2,067,486	+				-0.0
2,067,486	+				-0.0
2,067,487	-				-0.4
2,067,487	-				+0.3
2,067,487	-				+1.3
2,067,488	+				+0.1
2,067,488	+				+0.1
2,067,522	+				-0.5
2,067,522	+				+0.3
2,067,522	+				-0.6
2,067,523	-				-0.8
2,067,579	+				-0.6
2,067,579	+				+0.4
2,067,579	+				-0.1
2,067,579	+				-0.3
2,067,579	+				+0.2
2,067,579	+				-0.1
2,067,579	+				+0.3
2,067,579	+				-0.0
2,067,580	-				-0.0
2,067,580	-				-0.3
2,067,580	-				-0.2
2,067,580	-				-0.1
2,067,587	+				+0.2
2,067,587	+				+0.4
2,067,591	-				-1.4
2,067,591	-				-0.2
2,067,912	-		PS417_09550	0.71	+0.3
2,068,021	+				-0.3