Strain Fitness in Pseudomonas simiae WCS417 around PS417_05510

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,238,427	+		PS417_05505	0.34	-1.9
1,238,428	-		PS417_05505	0.34	-1.2
1,238,584	+		PS417_05505	0.46	+0.6
1,238,623	+		PS417_05505	0.48	-0.7
1,238,624	-		PS417_05505	0.48	-1.4
1,238,636	-		PS417_05505	0.49	-1.0
1,238,666	-				-0.3
1,238,761	+		PS417_05505	0.58	-0.8
1,239,155	-		PS417_05505	0.87	-2.4
1,239,155	-		PS417_05505	0.87	-1.0
1,239,155	-		PS417_05505	0.87	-1.9
1,239,155	-		PS417_05505	0.87	-0.3
1,239,232	+				-1.5
1,239,350	-				-3.1
1,239,495	+		PS417_05510	0.16	-1.9
1,239,496	-		PS417_05510	0.17	-0.7
1,239,657	+		PS417_05510	0.33	-3.1
1,239,657	+		PS417_05510	0.33	-1.4
1,239,657	+		PS417_05510	0.33	-2.2
1,239,657	+		PS417_05510	0.33	-3.5
1,239,657	+		PS417_05510	0.33	+0.9
1,239,658	-		PS417_05510	0.34	-1.0
1,239,703	-		PS417_05510	0.38	-2.4
1,239,720	+		PS417_05510	0.40	-1.0
1,239,882	-		PS417_05510	0.57	+1.0
1,240,035	+		PS417_05510	0.73	-2.1
1,240,414	+				-2.3
1,240,414	+				-0.0
1,240,414	+				-1.6
1,240,415	-				-0.9
1,240,415	-				+1.4
1,240,609	+		PS417_05515	0.26	+0.5
1,240,842	-		PS417_05515	0.46	+0.0
1,240,873	+		PS417_05515	0.49	-0.4
1,240,873	+		PS417_05515	0.49	-1.1
1,240,874	-		PS417_05515	0.49	-1.1
1,240,874	-		PS417_05515	0.49	-0.6
1,240,874	-		PS417_05515	0.49	-0.4
1,240,874	-		PS417_05515	0.49	+1.5
1,240,874	-		PS417_05515	0.49	-0.7
1,240,874	-		PS417_05515	0.49	-0.8
1,241,099	-		PS417_05515	0.69	-1.0
1,241,201	-		PS417_05515	0.78	-0.5
1,241,201	-		PS417_05515	0.78	-1.0
1,241,244	+		PS417_05515	0.82	-0.2
1,241,244	+		PS417_05515	0.82	+1.0
1,241,245	-		PS417_05515	0.82	-1.3
1,241,245	-		PS417_05515	0.82	-2.5
1,241,245	-		PS417_05515	0.82	-1.5
1,241,257	-		PS417_05515	0.83	-1.4
1,241,266	+		PS417_05515	0.84	-0.3
1,241,266	+		PS417_05515	0.84	-1.7
1,241,266	+		PS417_05515	0.84	-1.3
1,241,267	-				-1.3