Strain Fitness in Pseudomonas simiae WCS417 around PS417_26225

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
5,667,138	+		PS417_26220	0.90	+0.8
5,667,154	-				-1.7
5,667,165	+				-1.7
5,667,166	-				-1.7
5,667,243	+				-1.9
5,667,270	+				+0.0
5,667,285	+				-0.9
5,667,286	-				+0.4
5,667,307	+				+1.4
5,667,307	+				-1.0
5,667,308	-				-0.3
5,667,357	-				-0.5
5,667,458	+				-0.3
5,667,466	+				-0.4
5,667,467	-				-0.2
5,667,495	+				+0.7
5,667,521	+				+1.0
5,667,522	-				-0.4
5,667,625	+				+0.0
5,667,659	+				+0.6
5,667,660	-				+0.1
5,667,705	+				+1.0
5,668,192	-		PS417_26225	0.19	-0.6
5,668,246	-		PS417_26225	0.26	-0.3
5,668,359	+		PS417_26225	0.41	-1.6
5,668,567	+		PS417_26225	0.68	-0.6
5,668,683	+		PS417_26225	0.83	-0.8
5,668,684	-		PS417_26225	0.83	+0.5
5,668,684	-		PS417_26225	0.83	-0.7
5,669,031	-		PS417_26230	0.17	+3.0
5,669,085	+		PS417_26230	0.21	-0.2
5,669,087	+		PS417_26230	0.21	-0.5
5,669,087	+				-0.0
5,669,087	+		PS417_26230	0.21	+0.2
5,669,088	-		PS417_26230	0.22	+0.7
5,669,245	+		PS417_26230	0.34	-0.2
5,669,777	+				-0.3
5,669,777	+		PS417_26230	0.78	-0.7