Strain Fitness in Pseudomonas simiae WCS417 around PS417_26095

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
5,640,207	+		PS417_26085	0.45	-2.1
5,640,208	-		PS417_26085	0.45	-0.1
5,640,208	-		PS417_26085	0.45	-0.5
5,640,414	+		PS417_26085	0.64	+1.2
5,640,654	+		PS417_26085	0.86	+0.0
5,640,655	-		PS417_26085	0.86	-0.6
5,640,774	+				-0.0
5,640,774	+				+1.2
5,640,775	-				-0.6
5,640,817	+				-0.6
5,640,818	-				+0.1
5,640,840	+				-0.7
5,640,840	+				-0.2
5,640,840	+				+0.1
5,640,841	-				+1.1
5,640,841	-				-0.5
5,640,841	-				+0.0
5,640,999	+				-0.1
5,640,999	+				-1.6
5,641,062	-				-0.1
5,641,130	+				+0.3
5,641,130	+				+0.9
5,641,130	+				+0.8
5,641,130	+				-0.0
5,641,131	-				-0.1
5,641,131	-				-0.1
5,641,131	-				-1.5
5,641,290	-		PS417_26095	0.17	-0.1
5,641,290	-		PS417_26095	0.17	+0.6
5,641,338	-		PS417_26095	0.22	+0.4
5,641,377	+		PS417_26095	0.25	+0.2
5,641,711	+		PS417_26095	0.58	-0.1
5,641,711	+		PS417_26095	0.58	-1.2
5,641,712	-		PS417_26095	0.58	-0.7
5,642,093	-				-0.5
5,642,131	-				-0.2
5,642,136	+				-0.0
5,642,137	-				+0.4
5,642,142	-				+0.8
5,642,145	+				+0.6
5,642,272	+		PS417_26100	0.16	-0.0
5,642,480	-		PS417_26100	0.43	+0.3
5,642,572	+		PS417_26100	0.55	+0.0
5,642,573	-		PS417_26100	0.55	-0.8
5,642,591	-		PS417_26100	0.58	-0.4
5,642,591	-		PS417_26100	0.58	+0.6
5,642,605	+		PS417_26100	0.59	-0.4
5,642,606	-		PS417_26100	0.60	+0.1
5,642,705	-		PS417_26100	0.73	+0.3
5,642,869	+				+0.2
5,642,869	+				-0.7
5,642,869	+				+2.6
5,642,869	+				-0.0
5,642,869	+				+0.4
5,642,869	+				+0.4
5,642,870	-				+0.2
5,642,870	-				-0.9
5,642,871	+				-0.3
5,642,871	+				-0.4
5,642,871	+				-0.5
5,642,872	-				-1.6
5,642,890	+				-0.0
5,642,909	-				+0.5
5,642,909	-				+0.1
5,642,909	-				-0.3
5,642,909	-				-0.2
5,642,909	-				-1.3
5,642,992	+				+0.4
5,642,992	+				-0.3
5,642,992	+				+2.3
5,642,992	+				-0.4
5,642,993	-				-0.2
5,642,993	-				-0.6