Strain Fitness in Pseudomonas simiae WCS417 around PS417_23815

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
5,153,067	+		PS417_23810	0.70	-0.1
5,153,068	-		PS417_23810	0.70	+0.8
5,153,068	-		PS417_23810	0.70	+0.0
5,153,068	-		PS417_23810	0.70	+1.6
5,153,149	-		PS417_23810	0.75	+0.2
5,153,228	-		PS417_23810	0.79	+0.7
5,153,228	-		PS417_23810	0.79	+2.0
5,153,319	+		PS417_23810	0.84	+0.5
5,153,319	+		PS417_23810	0.84	+0.2
5,153,320	-		PS417_23810	0.84	+0.2
5,153,320	-		PS417_23810	0.84	+0.2
5,153,320	-		PS417_23810	0.84	-0.3
5,153,320	-		PS417_23810	0.84	-0.8
5,153,487	+				-0.2
5,153,520	+				+1.3
5,153,520	+				-0.7
5,153,520	+				+0.1
5,153,521	-				-0.4
5,153,524	+				+0.4
5,153,526	+				+0.4
5,153,526	+				+0.1
5,153,527	-				+0.4
5,153,527	-				-0.4
5,153,577	-				-0.3
5,153,600	+				-0.0
5,153,613	+				-0.3
5,153,613	+				-1.1
5,153,640	+				+2.6
5,153,641	-				+0.8
5,153,643	+				+1.5
5,153,643	+				-0.2
5,153,649	+				+2.0
5,153,649	+				-0.3
5,153,649	+				+0.7
5,153,687	+				+0.5
5,153,775	-				+0.2
5,153,775	-				-0.2
5,154,185	-		PS417_23815	0.50	-0.3
5,154,313	+		PS417_23815	0.89	-1.0
5,154,313	+		PS417_23815	0.89	-0.2
5,154,313	+		PS417_23815	0.89	-0.5
5,154,313	+		PS417_23815	0.89	-0.2
5,154,314	-		PS417_23815	0.89	-0.5
5,154,314	-		PS417_23815	0.89	-0.9
5,154,314	-		PS417_23815	0.89	-0.3
5,154,314	-		PS417_23815	0.89	-1.1
5,154,528	+		PS417_23820	0.24	-0.8
5,154,528	+		PS417_23820	0.24	-1.2
5,154,742	+		PS417_23820	0.54	+0.1
5,154,742	+		PS417_23820	0.54	+0.6
5,154,742	+		PS417_23820	0.54	-0.6
5,154,743	-		PS417_23820	0.54	+0.2
5,154,743	-		PS417_23820	0.54	+1.0
5,154,743	-		PS417_23820	0.54	-1.7
5,154,743	-		PS417_23820	0.54	-1.5
5,154,870	+		PS417_23820	0.71	-2.0
5,155,055	+				-1.2
5,155,058	+				-0.9
5,155,059	-				-1.3
5,155,059	-				-1.0
5,155,199	+				-0.4
5,155,200	-				-0.3