Strain Fitness in Pseudomonas simiae WCS417 around PS417_10620

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
2,265,475	-		PS417_10615	0.32	-0.5
2,265,475	-		PS417_10615	0.32	-0.1
2,265,475	-		PS417_10615	0.32	-0.6
2,265,475	-		PS417_10615	0.32	-0.4
2,265,928	+		PS417_10615	0.79	-0.6
2,265,929	-		PS417_10615	0.79	-0.6
2,265,929	-		PS417_10615	0.79	-0.7
2,266,057	-				-0.0
2,266,328	+				+0.1
2,266,331	+				+2.0
2,266,331	+				-0.5
2,266,331	+				-0.4
2,266,332	-				-0.2
2,266,332	-				+0.1
2,266,486	+		PS417_10620	0.30	-1.5
2,266,486	+		PS417_10620	0.30	+0.4
2,266,486	+		PS417_10620	0.30	+3.3
2,266,486	+		PS417_10620	0.30	-0.5
2,266,684	+		PS417_10620	0.62	-0.4
2,266,684	+		PS417_10620	0.62	-0.2
2,266,685	-		PS417_10620	0.62	-0.4
2,266,699	+				+0.7
2,266,699	+		PS417_10620	0.64	+0.3
2,266,700	-		PS417_10620	0.64	+0.6
2,266,700	-		PS417_10620	0.64	-0.6
2,266,717	+		PS417_10620	0.67	+0.1
2,266,717	+		PS417_10620	0.67	-0.5
2,266,718	-		PS417_10620	0.67	-0.2
2,266,718	-		PS417_10620	0.67	-0.6
2,266,724	-		PS417_10620	0.68	+0.3
2,266,733	-		PS417_10620	0.70	-0.5
2,266,741	+		PS417_10620	0.71	+0.0
2,266,750	+		PS417_10620	0.72	+0.3
2,266,750	+				+0.4
2,266,751	-		PS417_10620	0.73	-1.1
2,266,786	+		PS417_10620	0.78	-1.1
2,266,787	-		PS417_10620	0.78	+0.2
2,266,826	+		PS417_10620	0.85	+0.0
2,266,827	-		PS417_10620	0.85	+1.3
2,266,846	+		PS417_10620	0.88	+0.2
2,266,847	-		PS417_10620	0.88	-0.2
2,266,847	-		PS417_10620	0.88	-0.2
2,266,847	-		PS417_10620	0.88	+0.3
2,266,847	-		PS417_10620	0.88	-0.2
2,266,847	-		PS417_10620	0.88	-0.3
2,266,919	-				+1.3
2,266,952	+				+0.5
2,266,952	+				-0.1
2,266,953	-				-1.3
2,266,975	-				-0.4
2,266,975	-				+0.0
2,267,006	+				-0.2
2,267,007	-				+0.5
2,267,045	+				+1.2
2,267,045	+				-0.5
2,267,046	-				+0.0
2,267,047	+				+0.2
2,267,048	-				-0.3
2,267,049	+				-0.4
2,267,050	-				+1.4
2,267,050	-				-0.7
2,267,050	-				-0.7
2,267,050	-				-1.3
2,267,050	-				-0.2
2,267,050	-				-0.8
2,267,050	-				-0.6
2,267,050	-				+1.2
2,267,063	+				+0.1
2,267,064	-				-0.8
2,267,166	-		PS417_10625	0.16	-0.8
2,267,180	+		PS417_10625	0.18	-0.8
2,267,181	-		PS417_10625	0.18	-0.1
2,267,199	+		PS417_10625	0.19	+0.5
2,267,200	-		PS417_10625	0.19	-1.2
2,267,200	-		PS417_10625	0.19	-0.3
2,267,334	+		PS417_10625	0.31	+0.5
2,267,334	+		PS417_10625	0.31	+0.4
2,267,335	-		PS417_10625	0.31	-0.1
2,267,335	-		PS417_10625	0.31	+0.2
2,267,442	+		PS417_10625	0.40	+0.1
2,267,443	-				-1.7
2,267,443	-		PS417_10625	0.40	-0.0
2,267,480	+		PS417_10625	0.43	+0.1
2,267,481	-		PS417_10625	0.43	+0.1
2,267,485	-		PS417_10625	0.44	+0.6
2,267,522	+		PS417_10625	0.47	-0.2
2,267,522	+		PS417_10625	0.47	+0.0
2,267,522	+		PS417_10625	0.47	+0.0
2,267,523	-		PS417_10625	0.47	+0.7
2,267,649	-		PS417_10625	0.58	-0.3