Strain Fitness in Pseudomonas simiae WCS417 around PS417_07485

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
1,645,147	-				+1.4
1,645,213	-				+0.6
1,645,224	+				-0.9
1,645,224	+				+1.2
1,645,225	-				-0.6
1,645,225	-				+0.5
1,645,225	-				-0.6
1,645,252	+				-0.1
1,645,252	+				-0.1
1,645,480	-		PS417_07485	0.51	+0.4
1,645,480	-		PS417_07485	0.51	+0.3
1,645,489	+		PS417_07485	0.52	+0.3
1,645,511	+		PS417_07485	0.56	+0.1
1,645,577	+		PS417_07485	0.69	+0.5
1,645,577	+		PS417_07485	0.69	+0.5
1,645,578	-		PS417_07485	0.69	+0.3
1,645,578	-		PS417_07485	0.69	+0.6
1,645,578	-		PS417_07485	0.69	-1.2
1,645,578	-		PS417_07485	0.69	+1.2
1,645,578	-		PS417_07485	0.69	+0.7
1,645,578	-		PS417_07485	0.69	-0.2
1,645,599	+		PS417_07485	0.73	+0.5
1,645,599	+		PS417_07485	0.73	+0.5
1,645,600	-		PS417_07485	0.73	-0.1
1,645,600	-		PS417_07485	0.73	-0.3
1,645,840	-				-1.2
1,645,885	+				+0.1
1,645,885	+				-0.2
1,645,885	+				+0.1
1,645,886	-				+0.4
1,645,888	-				-0.1
1,645,935	+		PS417_07490	0.13	-0.2
1,645,935	+		PS417_07490	0.13	-0.9
1,645,935	+		PS417_07490	0.13	+0.9
1,645,935	+		PS417_07490	0.13	-0.7
1,645,935	+		PS417_07490	0.13	-1.0
1,645,965	+		PS417_07490	0.15	+0.0
1,645,965	+		PS417_07490	0.15	+1.4
1,645,965	+		PS417_07490	0.15	+0.0
1,645,965	+		PS417_07490	0.15	-0.3
1,645,965	+		PS417_07490	0.15	-0.2
1,646,070	+		PS417_07490	0.24	+0.3
1,646,071	-		PS417_07490	0.24	-0.6
1,646,071	-		PS417_07490	0.24	-0.3
1,646,071	-		PS417_07490	0.24	-0.9
1,646,142	+		PS417_07490	0.30	-1.2
1,646,161	-		PS417_07490	0.32	-0.5
1,646,166	+		PS417_07490	0.32	+0.7
1,646,167	-		PS417_07490	0.32	+0.3
1,646,302	+		PS417_07490	0.44	+0.2
1,646,302	+		PS417_07490	0.44	+0.3
1,646,455	-		PS417_07490	0.57	-1.2