Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27800 and PS417_27805 are separated by 58 nucleotides PS417_27805 and PS417_27810 are separated by 22 nucleotides PS417_27810 and PS417_27815 are separated by 185 nucleotides
PS417_27800: PS417_27800 - exodeoxyribonuclease III, at 5,994,957 to 5,995,736
_27800
PS417_27805: PS417_27805 - orotate phosphoribosyltransferase, at 5,995,795 to 5,996,166
_27805
PS417_27810: PS417_27810 - ribonuclease PH, at 5,996,189 to 5,996,911
_27810
PS417_27815: PS417_27815 - hypothetical protein, at 5,997,097 to 5,997,960
_27815
Position (kb) 5996
5997 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5995.384 kb on - strand, within PS417_27800 at 5995.389 kb on + strand, within PS417_27800 at 5995.389 kb on + strand, within PS417_27800 at 5995.389 kb on + strand, within PS417_27800 at 5995.389 kb on + strand, within PS417_27800 at 5995.404 kb on + strand, within PS417_27800 at 5995.404 kb on + strand, within PS417_27800 at 5995.404 kb on + strand, within PS417_27800 at 5995.516 kb on - strand, within PS417_27800 at 5995.557 kb on + strand, within PS417_27800 at 5995.558 kb on - strand, within PS417_27800 at 5995.558 kb on - strand, within PS417_27800 at 5995.796 kb on + strand at 5996.376 kb on + strand, within PS417_27810 at 5996.376 kb on + strand, within PS417_27810 at 5996.377 kb on - strand, within PS417_27810 at 5996.377 kb on - strand, within PS417_27810 at 5996.377 kb on - strand, within PS417_27810 at 5996.406 kb on + strand, within PS417_27810 at 5996.406 kb on + strand, within PS417_27810 at 5996.406 kb on + strand, within PS417_27810 at 5996.406 kb on + strand, within PS417_27810 at 5996.407 kb on - strand at 5996.407 kb on - strand, within PS417_27810 at 5996.407 kb on - strand, within PS417_27810 at 5996.407 kb on - strand, within PS417_27810 at 5996.407 kb on - strand, within PS417_27810 at 5996.407 kb on - strand, within PS417_27810 at 5996.571 kb on + strand, within PS417_27810 at 5996.571 kb on + strand, within PS417_27810 at 5996.571 kb on + strand, within PS417_27810 at 5996.571 kb on + strand, within PS417_27810 at 5996.572 kb on - strand, within PS417_27810 at 5996.572 kb on - strand, within PS417_27810 at 5996.572 kb on - strand, within PS417_27810 at 5996.755 kb on + strand, within PS417_27810 at 5996.825 kb on + strand, within PS417_27810 at 5996.851 kb on - strand at 5996.851 kb on - strand at 5996.952 kb on + strand at 5996.952 kb on + strand at 5996.953 kb on - strand at 5996.953 kb on - strand at 5996.954 kb on + strand at 5996.954 kb on + strand at 5996.954 kb on + strand at 5996.954 kb on + strand at 5996.954 kb on + strand at 5996.955 kb on - strand at 5996.955 kb on - strand at 5996.955 kb on - strand at 5996.984 kb on - strand at 5997.036 kb on - strand at 5997.053 kb on + strand at 5997.264 kb on + strand, within PS417_27815 at 5997.264 kb on + strand at 5997.858 kb on + strand, within PS417_27815 at 5997.858 kb on + strand, within PS417_27815
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 5,995,384 - PS417_27800 0.55 -1.2 5,995,389 + PS417_27800 0.55 -0.8 5,995,389 + PS417_27800 0.55 -1.0 5,995,389 + PS417_27800 0.55 -1.4 5,995,389 + PS417_27800 0.55 +2.2 5,995,404 + PS417_27800 0.57 +0.2 5,995,404 + PS417_27800 0.57 -0.6 5,995,404 + PS417_27800 0.57 +2.2 5,995,516 - PS417_27800 0.72 +0.6 5,995,557 + PS417_27800 0.77 +1.2 5,995,558 - PS417_27800 0.77 +0.2 5,995,558 - PS417_27800 0.77 +0.6 5,995,796 + +0.5 5,996,376 + PS417_27810 0.26 -2.0 5,996,376 + PS417_27810 0.26 +0.6 5,996,377 - PS417_27810 0.26 -0.3 5,996,377 - PS417_27810 0.26 -1.3 5,996,377 - PS417_27810 0.26 +2.2 5,996,406 + PS417_27810 0.30 -0.7 5,996,406 + PS417_27810 0.30 -1.4 5,996,406 + PS417_27810 0.30 -2.2 5,996,406 + PS417_27810 0.30 +3.4 5,996,407 - -0.8 5,996,407 - PS417_27810 0.30 -0.5 5,996,407 - PS417_27810 0.30 -1.3 5,996,407 - PS417_27810 0.30 -2.9 5,996,407 - PS417_27810 0.30 -1.2 5,996,407 - PS417_27810 0.30 -2.4 5,996,571 + PS417_27810 0.53 -1.6 5,996,571 + PS417_27810 0.53 -2.3 5,996,571 + PS417_27810 0.53 -2.3 5,996,571 + PS417_27810 0.53 -0.4 5,996,572 - PS417_27810 0.53 -2.3 5,996,572 - PS417_27810 0.53 -2.2 5,996,572 - PS417_27810 0.53 -0.7 5,996,755 + PS417_27810 0.78 -1.0 5,996,825 + PS417_27810 0.88 -1.3 5,996,851 - -1.8 5,996,851 - -0.2 5,996,952 + -1.6 5,996,952 + -1.5 5,996,953 - -1.0 5,996,953 - -3.9 5,996,954 + -2.0 5,996,954 + +0.7 5,996,954 + -0.4 5,996,954 + -0.7 5,996,954 + +0.3 5,996,955 - +2.5 5,996,955 - +1.0 5,996,955 - +0.2 5,996,984 - -1.0 5,997,036 - +0.5 5,997,053 + -0.1 5,997,264 + PS417_27815 0.19 -0.6 5,997,264 + +2.2 5,997,858 + PS417_27815 0.88 -1.2 5,997,858 + PS417_27815 0.88 -0.8
Or see this region's nucleotide sequence