Experiment: Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_18540 and PS417_18545 are separated by 257 nucleotides PS417_18545 and PS417_18550 overlap by 17 nucleotides PS417_18550 and PS417_18555 overlap by 4 nucleotides
PS417_18540: PS417_18540 - colicin V production CvpA, at 4,025,974 to 4,026,531
_18540
PS417_18545: PS417_18545 - cell division protein, at 4,026,789 to 4,027,451
_18545
PS417_18550: PS417_18550 - folylpolyglutamate synthase, at 4,027,435 to 4,028,742
_18550
PS417_18555: PS417_18555 - acetyl-CoA carboxylase subunit beta, at 4,028,739 to 4,029,659
_18555
Position (kb) 4027
4028
4029 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4026.523 kb on - strand at 4026.684 kb on + strand at 4026.931 kb on + strand, within PS417_18545 at 4026.938 kb on + strand, within PS417_18545 at 4027.430 kb on - strand at 4028.795 kb on - strand at 4028.795 kb on - strand at 4029.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 remove 4,026,523 - -1.9 4,026,684 + +1.5 4,026,931 + PS417_18545 0.21 -1.9 4,026,938 + PS417_18545 0.22 -3.5 4,027,430 - -0.7 4,028,795 - -3.0 4,028,795 - -1.0 4,029,724 - -2.8
Or see this region's nucleotide sequence